RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 L3HYPDHQ96EM0 354 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 PTCD3Q96EY7 689 aaKnown RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 HIST1H2AHQ96KK5 128 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 NSMCE3Q96MG7 304 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 BIRC8Q96P09 236 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 SORT1Q99523 831 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 HIST1H2AJQ99878 128 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 HEPHQ9BQS7 1158 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 CCDC28BQ9BUN5 200 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 OSBPL6Q9BZF3 934 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 C20orf27Q9GZN8 174 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 DERL2Q9GZP9 239 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 CLPBQ9H078 707 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 COG4Q9H9E3 785 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 IL26Q9NPH9 171 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 DUS2Q9NX74 493 aaKnown RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 OBP2AQ9NY56 170 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 PLK2Q9NYY3 685 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 GDE1Q9NZC3 331 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 XPR1Q9UBH6 696 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 DKK2Q9UBU2 259 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 MARCOQ9UEW3 520 aaPredicted RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 EVLQ9UI08 416 aaPredicted RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 TAGLN3Q9UI15 199 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 SLCO3A1Q9UIG8 710 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 TRMT6Q9UJA5 497 aaKnown RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 INTS6Q9UL03 887 aaKnown RBP4.38□□□□□ -1.71
SRP54-212ENST00000556992 CLEC4EQ9ULY5 219 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 ERVW-1Q9UQF0 538 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 CCL26Q9Y258 94 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 ZNF711Q9Y462 761 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 ANK1P16157 1881 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 RALGAPA2Q2PPJ7 1873 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 KAT6AQ92794 2004 aa4.38□□□□□ -1.71
SRP54-212ENST00000556992 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 C1orf232A0A0U1RR37 186 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CAPN8A6NHC0 703 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 E5RI56 91 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ZNF195O14628 629 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 PRMT5O14744 637 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 KPNA5O15131 536 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 HOXC11O43248 304 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 GRID2O43424 1007 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 KERAO60938 352 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 VPS4BO75351 444 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 GPC4O75487 556 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 WISP3O95389 354 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 PIGNO95427 931 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CLDN7O95471 211 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 NFATC1O95644 943 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SLC4A1P02730 911 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CA3P07451 260 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 F7P08709 466 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 CISD3P0C7P0 127 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CYP2A6P11509 494 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 MYOGP15173 224 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CTPS1P17812 591 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 NCF2P19878 526 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 XPAP23025 273 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 RPS3P23396 243 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRP54-212ENST00000556992 DGKAP23743 735 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 PRDX6P30041 224 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 HNRNPH1P31943 449 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 NRIP1P48552 1158 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 NUMBP49757 651 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 RGS4P49798 205 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ALDH18A1P54886 795 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 ST8SIA6P61647 398 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 HERVK_113P63132 956 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 IRX1P78414 480 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 NTHL1P78549 312 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRP54-212ENST00000556992 NFATC2Q13469 925 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 PEX6Q13608 980 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SEMA3AQ14563 771 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DHCR24Q15392 516 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SHHQ15465 462 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 RAB30Q15771 203 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 ZNF77Q15935 545 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SNCBQ16143 134 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CDKN3Q16667 212 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DUSP6Q16828 381 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SLC5A9Q2M3M2 681 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 FUT11Q495W5 492 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 PREPLQ4J6C6 727 aaPredicted RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 DNAL1Q4LDG9 190 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TECRLQ5HYJ1 363 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 FAM78AQ5JUQ0 283 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 SH2D4BQ5SQS7 431 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 WASHC2DQ5SRD0 308 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 C22orf39Q6P5X5 142 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CYB5D1Q6P9G0 228 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TTC23LQ6PF05 361 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 CRTC1Q6UUV9 634 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TMEM207Q6UWW9 146 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 TMEM184AQ6ZMB5 413 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 DPY19L3Q6ZPD9 716 aa4.37□□□□□ -1.71
SRP54-212ENST00000556992 EFL1Q7Z2Z2 1120 aaKnown RBP4.37□□□□□ -1.71
SRP54-212ENST00000556992 SERPINA9Q86WD7 417 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms