RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 PCSK2P16519 638 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 PTPN4P29074 926 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 CA5AP35218 305 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 ADPRHP54922 357 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 RPS21P63220 83 aaKnown RBP13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 CLCA4Q14CN2 919 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 MAVSQ7Z434 540 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 ARHGAP24Q8N264 748 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 OR14C36Q8NHC7 312 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 MCOLN3Q8TDD5 553 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 AGAP11Q8TF27 550 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 ATL1Q8WXF7 558 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 EBF4Q9BQW3 602 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 TAGLN3Q9UI15 199 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 CAPN7Q9Y6W3 813 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 TRPM6Q9BX84 2022 aa13.84□□□□□ -0.19
TRAPPC6B-206ENST00000556765 CAPN14A8MX76 684 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 MYO1CO00159 1063 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 PLRG1O43660 514 aaKnown RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 KCNJ13O60928 360 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CRCPO75575 148 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CDK14O94921 469 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SOD1P00441 154 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 ENO1P06733 434 aaKnown RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 GGT5P36269 586 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CASRP41180 1078 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 ATP4BP51164 291 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RPA4Q13156 261 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TGIF1Q15583 401 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 KANK2Q63ZY3 851 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RBM44Q6ZP01 1051 aaKnown RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 ASRGL1Q7L266 308 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 LRRC70Q7Z2Q7 622 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 AADATQ8N5Z0 425 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 ASB11Q8WXH4 323 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 COX14Q96I36 57 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 EGFL8Q99944 293 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 C1orf21Q9H246 121 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 MMADHCQ9H3L0 296 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 MID1IP1Q9NPA3 183 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 NLGN3Q9NZ94 848 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 WWOXQ9NZC7 414 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RP1L1Q8IWN7 2480 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3DA0A087WVF3 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3IA0A087WXS9 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SLC5A10A0PJK1 596 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3LB9A6J9 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 GFYI3L273 518 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 E2F3O00716 465 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SGTAO43765 313 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 PCDH8O95206 1070 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CATP04040 527 aaKnown RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3HP0C7X1 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 MAP4P27816 1152 aaKnown RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RPIAP49247 311 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 HK3P52790 923 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 METAP1P53582 386 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 HSPA14Q0VDF9 509 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 BOP1Q14137 746 aaKnown RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 HERC3Q15034 1050 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 MAPRE2Q15555 327 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 DNAL1Q4LDG9 190 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SLC9B1Q4ZJI4 515 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3CQ6IPX1 549 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 UBE2R2Q712K3 238 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RASGRP3Q8IV61 690 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SLC22A15Q8IZD6 547 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 TBC1D3Q8IZP1 549 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RASGEF1AQ8N9B8 481 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RHBDF1Q96CC6 855 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 PTCD3Q96EY7 689 aaKnown RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 HGH1Q9BTY7 390 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 NUF2Q9BZD4 464 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CD244Q9BZW8 370 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RASSF4Q9H2L5 321 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 DPEP2Q9H4A9 486 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 RMI1Q9H9A7 625 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 OPTCQ9UBM4 332 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 IKZF3Q9UKT9 509 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CNOT6Q9ULM6 557 aaKnown RBP13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 OTOGQ6ZRI0 2925 aa13.82□□□□□ -0.2
TRAPPC6B-206ENST00000556765 ANKRD12Q6UB98 2062 aa13.81□□□□□ -0.2
TRAPPC6B-206ENST00000556765 CCDC187A0A096LP49 1063 aa13.81□□□□□ -0.2
TRAPPC6B-206ENST00000556765 K7EPI3 171 aa13.81□□□□□ -0.2
TRAPPC6B-206ENST00000556765 SDHDO14521 159 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms