RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TCF7L2Q9NQB0 619 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 PDRG1Q9NUG6 133 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 COMMD8Q9NX08 183 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 SPG21Q9NZD8 308 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 AKAP7Q9P0M2 348 aaPredicted RBP4.04□□□□□ -1.76
PRPF39-210ENST00000556718 LRWD1Q9UFC0 647 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 KCNG2Q9UJ96 466 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 GMEB2Q9UKD1 530 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 FBXW2Q9UKT8 454 aa4.04□□□□□ -1.76
PRPF39-210ENST00000556718 ISY1Q9ULR0 285 aaKnown RBP4.04□□□□□ -1.76
PRPF39-210ENST00000556718 PCDH11YQ9BZA8 1340 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 TEX13DA0A0J9YY54 714 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 E9PI62 339 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PLOD2O00469 737 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CTDSPLO15194 276 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SYNGR3O43761 229 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SLC16A8O95907 504 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GSRP00390 522 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 HMOX1P09601 288 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 STAG3L1P0CL83 205 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 HSPA8P11142 646 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 LBPP18428 481 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 JAK1P23458 1154 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PSMB4P28070 264 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 RPL21P46778 160 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CDX1P47902 265 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GMPSP49915 693 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 NME5P56597 212 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GSDMDP57764 484 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 FOLH1Q04609 750 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SULT2A1Q06520 285 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 DMPKQ09013 629 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GAGE5Q13069 117 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GAGE6Q13070 117 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SNTA1Q13424 505 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 RBBP7Q16576 425 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CA9Q16790 459 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 ODF4Q2M2E3 257 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SLC39A12Q504Y0 691 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 C9orf57Q5W0N0 161 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CYB5D1Q6P9G0 228 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PIWIL4Q7Z3Z4 852 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PIGWQ7Z7B1 504 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 ZNF554Q86TJ5 538 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CCDC83Q8IWF9 413 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PEX5LQ8IYB4 626 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CDK20Q8IZL9 346 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SEPT1Q8WYJ6 367 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SNRNP40Q96DI7 357 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 EEF2KMTQ96G04 330 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 FAM71F1Q96KD3 344 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 GAL3ST4Q96RP7 486 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 POLR3CQ9BUI4 534 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SLC2A11Q9BYW1 496 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 RNPEPL1Q9HAU8 725 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 APOBEC3GQ9HC16 384 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 PKD2L2Q9NZM6 624 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 RALYQ9UKM9 306 aaKnown RBP4.03□□□□□ -1.76
PRPF39-210ENST00000556718 SLC7A7Q9UM01 511 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CHKBQ9Y259 395 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 TMED3Q9Y3Q3 217 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 TRIM17Q9Y577 477 aa4.03□□□□□ -1.76
PRPF39-210ENST00000556718 CGNL1Q0VF96 1302 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 ILVBLA1L0T0 632 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 SYCE3A1L190 88 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 SMIM30A4D0T7 59 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF587BE7ETH6 402 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 TTI1O43156 1089 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 ATP6AP2O75787 350 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 OLFM2O95897 454 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 MOCS2O96007 188 aaPredicted RBP4.02□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF12P17014 697 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 IER3P46695 156 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
PRPF39-210ENST00000556718 BRWD1-AS2P59051 145 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 CACNG1Q06432 222 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 RPS6KA1Q15418 735 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 MAPK11Q15759 364 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 UGT3A2Q3SY77 523 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 IFI44LQ53G44 452 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 LBHQ53QV2 105 aaPredicted RBP4.02□□□□□ -1.77
PRPF39-210ENST00000556718 PDSS1Q5T2R2 415 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 CYP4A22Q5TCH4 519 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 LRRC38Q5VT99 294 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 TATDN1Q6P1N9 297 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 C16orf82Q7Z2V1 217 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 SATL1Q86VE3 508 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 ANKRD46Q86W74 232 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 BMPERQ8N8U9 685 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 CCDC63Q8NA47 563 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 CKAP2Q8WWK9 683 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 PYCR2Q96C36 320 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 SGF29Q96ES7 293 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 NSL1Q96IY1 281 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 URM1Q9BTM9 101 aaKnown RBP4.02□□□□□ -1.77
PRPF39-210ENST00000556718 LRRC1Q9BTT6 524 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 CSTL1Q9H114 145 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 S1PR5Q9H228 398 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms