RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CEP70Q8NHQ1 597 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ACTRT2Q8TDY3 377 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 FUBP1Q96AE4 644 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 VOPP1Q96AW1 172 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 CMTM5Q96DZ9 223 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PTCD3Q96EY7 689 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 BTBD10Q9BSF8 475 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ZSCAN5AQ9BUG6 496 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TRMT61BQ9BVS5 477 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TRIM54Q9BYV2 358 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 NUF2Q9BZD4 464 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 SHCBP1LQ9BZQ2 653 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 MTG2Q9H4K7 406 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 GSTO2Q9H4Y5 243 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TRIM39Q9HCM9 518 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 MID1IP1Q9NPA3 183 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 HPS4Q9NQG7 708 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ACSS2Q9NR19 701 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 SMOXQ9NWM0 555 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 ARMCX1Q9P291 453 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 GALPQ9UBC7 116 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 STK38LQ9Y2H1 464 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TRAF6Q9Y4K3 522 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PLXNA2O75051 1894 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 PTPRBP23467 1997 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 THADAQ6YHU6 1953 aa6.66□□□□□ -1.34
SLIRP-204ENST00000555890 MUC22E2RYF6 1773 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 IGLV3-16A0A075B6K0 115 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 IQCF5A8MTL0 148 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CAPN14A8MX76 684 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 PATE3B3GLJ2 98 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 NEMP1O14524 444 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 WNT9AO14904 365 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 NPC1O15118 1278 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 BRINP1O60477 761 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 RNASEH1O60930 286 aaKnown RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 VPS4BO75351 444 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 KATNA1O75449 491 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GPC4O75487 556 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 RASSF9O75901 435 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 AP2A2O94973 939 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 KAT7O95251 611 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MLYCDO95822 493 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 TSPAN12O95859 305 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CHEK2O96017 543 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 FTH1P02794 183 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CTSLP07711 333 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 FGF4P08620 206 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ELFN1P0C7U0 828 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 VSIG8P0DPA2 414 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 THRAP10827 490 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MTHFD2P13995 350 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ATP1B2P14415 290 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ITGB6P18564 788 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MSH3P20585 1137 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ITGB7P26010 798 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 COL8A1P27658 744 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GDI1P31150 447 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GNALP38405 381 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MMP12P39900 470 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 OPRD1P41143 372 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GRIA2P42262 883 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 TMPRSS3P57727 454 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 KCNJ2P63252 427 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GABREP78334 506 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ELF3P78545 371 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CDC16Q13042 620 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 LCP2Q13094 533 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF234Q14588 700 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ACOX1Q15067 660 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 PDCD2Q16342 344 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GAB4Q2WGN9 574 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 TTC31Q49AM3 519 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 DNAL1Q4LDG9 190 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 SLC9B1Q4ZJI4 515 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 LRRC73Q5JTD7 316 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 LDLRAP1Q5SW96 308 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 C9orf64Q5T6V5 341 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CYB5D1Q6P9G0 228 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 POMZP3Q6PJE2 187 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 Q6ZVL8 140 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 HSD11B1LQ7Z5J1 315 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GALNT15Q8N3T1 639 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 HDDC3Q8N4P3 179 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CPSF7Q8N684 471 aaKnown RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CLDN19Q8N6F1 224 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 TEX9Q8N6V9 391 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF366Q8N895 744 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 BVESQ8NE79 360 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 OR56A4Q8NGH8 313 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 GIMAP7Q8NHV1 300 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MAPK15Q8TD08 544 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 CSGALNACT1Q8TDX6 532 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 RAB7BQ96AH8 199 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 MCUR1Q96AQ8 359 aa6.65□□□□□ -1.34
SLIRP-204ENST00000555890 SLC7A6OSQ96CW6 309 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-204ENST00000555890 RIOK2Q9BVS4 552 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms