RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MIPEPQ99797 713 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 ARRDC1-AS1Q9H2J1 176 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 SRMSQ9H3Y6 488 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 POT1Q9NUX5 634 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 HEY2Q9UBP5 337 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 GIMAP2Q9UG22 337 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 DYRK1BQ9Y463 629 aa9.86□□□□□ -0.83
SRP54-208ENST00000555557 CACNA1EQ15878 2313 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 GPR179Q6PRD1 2367 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 ZNF839A8K0R7 811 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 GIMD1P0DJR0 217 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 CDH1P12830 882 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 SLC2A4P14672 509 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 GNAZP19086 355 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 HMOX2P30519 316 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 RXRGP48443 463 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 NEK2P51955 445 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 ABRAXAS2Q15018 415 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 IL27RAQ6UWB1 636 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 LCTLQ6UWM7 567 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 SLCO4C1Q6ZQN7 724 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 AFAP1L2Q8N4X5 818 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 L3MBTL4Q8NA19 623 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 OR2A1Q8NGT9 310 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 OR10G6Q8NH81 332 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 SETD7Q8WTS6 366 aaKnown RBP9.85□□□□□ -0.83
SRP54-208ENST00000555557 SLC5A11Q8WWX8 675 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 TBC1D10AQ9BXI6 508 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 SPNS1Q9H2V7 528 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 GAREM1Q9H706 876 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 CAPN10Q9HC96 672 aa9.85□□□□□ -0.83
SRP54-208ENST00000555557 CUEDC1Q9NWM3 386 aaPredicted RBP9.85□□□□□ -0.83
SRP54-208ENST00000555557 KCNE1BA0A087WTH5 132 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 A0A1B0GTQ1 180 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 OR6C74A6NCV1 312 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ISM1B1AKI9 464 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 E9PBE3 544 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 H7BY64 318 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 SDHDO14521 159 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 KLHL41O60662 606 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 CHRM5P08912 532 aaPredicted RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 POLR2CP19387 275 aaPredicted RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 CCND1P24385 295 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 SHMT2P34897 504 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 HK2P52789 917 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TUBB3Q13509 450 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ZRSR2Q15696 482 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 LSM12Q3MHD2 195 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 NXNQ6DKJ4 435 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TCEAL6Q6IPX3 200 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ADNP2Q6IQ32 1131 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TMEM26Q6ZUK4 368 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 MTDHQ86UE4 582 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 ADGRF3Q8IZF5 1079 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 RNF175Q8N4F7 328 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ANKS4BQ8N8V4 417 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ZNF740Q8NDX6 193 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 CEP76Q8TAP6 659 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 HMGCLL1Q8TB92 370 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TCEAL3Q969E4 200 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 C19orf60Q96EN9 201 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 FAR2Q96K12 515 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 PRAP1Q96NZ9 151 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 SIKE1Q9BRV8 207 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 RAB11FIP5Q9BXF6 653 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 MEAF6Q9HAF1 191 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 GPRC5BQ9NZH0 403 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 OR6C2Q9NZP2 312 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TRPS1Q9UHF7 1281 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 GMEB2Q9UKD1 530 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 G3BP2Q9UN86 482 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 STK38LQ9Y2H1 464 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 KLHL20Q9Y2M5 609 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 HCN4Q9Y3Q4 1203 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 KMT2EQ8IZD2 1858 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TRPC5OSA6NMA1 111 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 MANBAO00462 879 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 KDM1AO60341 852 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 NRP2O60462 931 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ULK1O75385 1050 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 CHEK2O96017 543 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ENO1P06733 434 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 C1GALT1C1LP0DN25 315 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 JUPP14923 745 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TYRP1P17643 537 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 EPHA8P29322 1005 aaPredicted RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 HOXD12P35452 270 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 MPLP40238 635 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 BIRC2Q13490 618 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 SF1Q15637 639 aaKnown RBP9.84□□□□□ -0.83
SRP54-208ENST00000555557 ZNF423Q2M1K9 1284 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 LIPJQ5W064 366 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 TMEM198Q66K66 360 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 SLC23A3Q6PIS1 610 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 OGFOD3Q6PK18 319 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 NXPE4Q6UWF7 544 aa9.84□□□□□ -0.83
SRP54-208ENST00000555557 ZNF438Q7Z4V0 828 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms