RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SMIM24O75264 130 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CSO75390 466 aaKnown RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 SPAG7O75391 227 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CCNDBP1O95273 360 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ZBTB11O95625 1053 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 GFAPP14136 432 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ST6GAL1P15907 406 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 NELFEP18615 380 aaKnown RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 TAC1P20366 129 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CDH3P22223 829 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ATP5F1P24539 256 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 PSMB5P28074 263 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CMPK1P30085 196 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 GRIA3P42263 894 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 GDF5P43026 501 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ETV4P43268 484 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 HSPA7P48741 367 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 PPM1FP49593 454 aaPredicted RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 YBX1P67809 324 aaKnown RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 EIF3IQ13347 325 aaKnown RBP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 E2F2Q14209 437 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 PRAMEF13Q5VWM6 474 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ZNF425Q6IV72 752 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ZYG11AQ6WRX3 759 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 TAX1BP1Q86VP1 789 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 SLC22A9Q8IVM8 553 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 D2HGDHQ8N465 521 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CHCHD4Q8N4Q1 142 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ABHD11Q8NFV4 315 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ESAMQ96AP7 390 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ZBTB9Q96C00 473 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 CCDC126Q96EE4 140 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 MED8Q96G25 268 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 TCTN2Q96GX1 697 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 STRADBQ9C0K7 418 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 WWOXQ9NZC7 414 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 GPRC5BQ9NZH0 403 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 ANKMY1Q9P2S6 941 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 OR2A25A4D2G3 310 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 A8MT66 165 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 A8MU76 341 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 K7EPI3 171 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 TM9SF1O15321 606 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 WDR47O94967 919 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 CPA3P15088 417 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 IMPDH1P20839 514 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 AGTR2P50052 363 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 PRKAA2P54646 552 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 CLDN6P56747 220 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 DNAJB13P59910 316 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 MAGOHP61326 146 aaKnown RBP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 HSD11B2P80365 405 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 TARDBPQ13148 414 aaKnown RBP eCLIP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 MPP2Q14168 576 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 C16orf72Q14CZ0 275 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ZIC1Q15915 447 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 SNAP47Q5SQN1 464 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 FIGLAQ6QHK4 219 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 FAM20CQ8IXL6 584 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 PTGR2Q8N8N7 351 aaPredicted RBP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 RCBTB1Q8NDN9 531 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 EXT2Q93063 718 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 PHF21BQ96EK2 531 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ATP6V1G3Q96LB4 118 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 CMKLR1Q99788 373 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 SARGQ9BW04 601 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ACAT2Q9BWD1 397 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 IQCGQ9H095 443 aaKnown RBP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 C12orf65Q9H3J6 166 aaKnown RBP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ENAMQ9NRM1 1142 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 DNAJC11Q9NVH1 559 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 OXSMQ9NWU1 459 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 SLC17A7Q9P2U7 560 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 COPG2Q9UBF2 871 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 KLHL3Q9UH77 587 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 MID2Q9UJV3 735 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 SNX7Q9UNH6 387 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ASB1Q9Y576 335 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 ANKRD12Q6UB98 2062 aa12.2□□□□□ -0.46
SYNE2-219ENST00000555323 E2F3O00716 465 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 RASSF9O75901 435 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 SIX3O95343 332 aaPredicted RBP12.19□□□□□ -0.46
SYNE2-219ENST00000555323 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 MYL2P10916 166 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 PVRP15151 417 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 GNAZP19086 355 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 EPORP19235 508 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 MAGP20916 626 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 CSTF2P33240 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNE2-219ENST00000555323 CASP2P42575 452 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 GABRA4P48169 554 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 NAA20P61599 178 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 HERVK_113P63132 956 aa12.19□□□□□ -0.46
SYNE2-219ENST00000555323 CDC16Q13042 620 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms