RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GP1BAP07359 652 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 VIMP08670 466 aaKnown RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
SHMT2-210ENST00000553950 GSTM2P28161 218 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 SERPINB1P30740 379 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 GRK3P35626 688 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 GDF5P43026 501 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 PHEXP78562 749 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 IRF8Q02556 426 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 ZNF33BQ06732 778 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 FASTKQ14296 549 aaKnown RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 HIST2H2ACQ16777 129 aaPredicted RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 PROX2Q3B8N5 592 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 HIST2H2AA3Q6FI13 130 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 SUSD1Q6UWL2 747 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 CUZD1Q86UP6 607 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 NAXDQ8IW45 347 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 WDR75Q8IWA0 830 aaKnown RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 ADGRF3Q8IZF5 1079 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 KRT78Q8N1N4 520 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 LMNTD1Q8N9Z9 388 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 TRPC4APQ8TEL6 797 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 CCDC74AQ96AQ1 378 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 ZDHHC12Q96GR4 267 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 CDC6Q99741 560 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 CCT7Q99832 543 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 CAAP1Q9H8G2 361 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 MRPS30Q9NP92 439 aaKnown RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 MID1IP1Q9NPA3 183 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 HRASLS2Q9NWW9 162 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 A0A0J9YY10 115 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 A0A1W2PPV9 198 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 LRRC14BA6NHZ5 514 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 EDF1O60869 148 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 LDOC1O95751 146 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 HGFP14210 728 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 HMOX2P30519 316 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 CASP2P42575 452 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 CCR8P51685 355 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 CDH13P55290 713 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 PRDX1Q06830 199 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 TRAF3Q13114 568 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 E2F2Q14209 437 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 SF1Q15637 639 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 C18orf21Q32NC0 220 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 XKR6Q5GH73 641 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 ATG9BQ674R7 924 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 GRHL2Q6ISB3 625 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 SPESP1Q6UW49 350 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 SPRED1Q7Z699 444 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 MILR1Q7Z6M3 343 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 PLXDC1Q8IUK5 500 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 L3MBTL4Q8NA19 623 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 TTLQ8NG68 377 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 OR2L3Q8NG85 312 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 NEIL2Q969S2 332 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 ESAMQ96AP7 390 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 WDR34Q96EX3 536 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 SEC16BQ96JE7 1060 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 CNDP2Q96KP4 475 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 NSUN5Q96P11 429 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 OR4K3Q96R72 315 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 AIF1LQ9BQI0 150 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 TBC1D10AQ9BXI6 508 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 ZBTB26Q9HCK0 441 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 VTI1BQ9UEU0 232 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 POMT2Q9UKY4 750 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 SNX6Q9UNH7 406 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 ASB1Q9Y576 335 aa13.99□□□□□ -0.17
SHMT2-210ENST00000553950 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
SHMT2-210ENST00000553950 MN1Q10571 1320 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 IGHV1OR21-1A0A087WYE8 117 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 PRAMEF33A0A0G2JMD5 474 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 TLCD2A6NGC4 264 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 E7EQ34 232 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 BTN3A3O00478 584 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 OR7A17O14581 309 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 AZIN1O14977 448 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 MAP3K7O43318 606 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 PRICKLE3O43900 615 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 TGDSO95455 350 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 KRT6AP02538 564 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 KRT6BP04259 564 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 CHRNGP07510 517 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 FGF4P08620 206 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 C1GALT1C1LP0DN25 315 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 UROSP10746 265 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 JUPP14923 745 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 UGT2B7P16662 529 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 NPPBP16860 134 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 CKMT2P17540 419 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 POLR2CP19387 275 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 KRT6CP48668 564 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 RPL14P50914 215 aaKnown RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 LIMK1P53667 647 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms