RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SULT2A1Q06520 285 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 DNAJC3Q13217 504 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF177Q13360 481 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 FZD2Q14332 565 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ASIC2Q16515 512 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 TAZQ16635 292 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SMTNL2Q2TAL5 461 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 NAPEPLDQ6IQ20 393 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 RFLNAQ6ZTI6 216 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 RFX8Q6ZV50 586 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ERN2Q76MJ5 926 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 HORMAD1Q86X24 394 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 VSTM4Q8IW00 320 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CCDC117Q8IWD4 279 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CHCHD4Q8N4Q1 142 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 PCDH20Q8N6Y1 951 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 TC2NQ8N9U0 490 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 OR2AP1Q8NGE2 309 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CEP76Q8TAP6 659 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF398Q8TD17 642 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ADAMTS14Q8WXS8 1223 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SYN2Q92777 582 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CENPTQ96BT3 561 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 VCPIP1Q96JH7 1222 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SNX22Q96L94 193 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CSPG4P5Q96PW8 444 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 HIST1H2AAQ96QV6 131 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 GTPBP2Q9BX10 602 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 EDEM3Q9BZQ6 932 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 BRD8Q9H0E9 1235 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 GOLPH3Q9H4A6 298 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SYNCQ9H7C4 482 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 MBNL1Q9NR56 388 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 TM7SF3Q9NS93 570 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 TBC1D23Q9NUY8 699 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 KLHL42Q9P2K6 505 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 NKX1-2Q9UD57 310 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 CNOT8Q9UFF9 292 aaKnown RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SUN2Q9UH99 717 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 SCML1Q9UN30 329 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 PLA2G4CQ9UP65 541 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 PCDHGB2Q9Y5G2 931 aa4.85□□□□□ -1.63
SCAF11-214ENST00000550893 UBR5O95071 2799 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-214ENST00000550893 URB1O60287 2271 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 FAM47DPA6NHR8 397 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 C16orf96A6NNT2 1141 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SDC3O75056 442 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 MTA2O94776 668 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 UGT2B4P06133 528 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 MMP2P08253 660 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PSMA2P25787 234 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PTGER1P34995 402 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CA5AP35218 305 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PCK1P35558 622 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PAPOLAP51003 745 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 ZBED6P86452 979 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 GFPT1Q06210 699 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 KLHL30Q0D2K2 578 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SLC10A7Q0GE19 358 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 TRAF2Q12933 501 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SLC14A1Q13336 389 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 BYSLQ13895 437 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 DPYSL3Q14195 570 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CDKN3Q16667 212 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 TTC31Q49AM3 519 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CARD16Q5EG05 197 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 WDR45BQ5MNZ6 344 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 NCBP2-AS2Q69YL0 99 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 IL31Q6EBC2 164 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 TMEM65Q6PI78 240 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CLEC9AQ6UXN8 241 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 KYAT3Q6YP21 454 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 DCDC5Q6ZRR9 648 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SLFN11Q7Z7L1 901 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 RBFAQ8N0V3 343 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PLD5Q8N7P1 536 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF557Q8N988 423 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 ATP11CQ8NB49 1132 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 OR8D1Q8WZ84 308 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 TADA1Q96BN2 335 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 EID2BQ96D98 161 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 ZNF48Q96MX3 618 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 WDR24Q96S15 920 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 FAM118BQ9BPY3 351 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SELENOOQ9BVL4 669 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 NUSAP1Q9BXS6 441 aaKnown RBP4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CLPBQ9H078 707 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 MAGEH1Q9H213 219 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PREBQ9HCU5 417 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 DNAJB11Q9UBS4 358 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 IL36AQ9UHA7 158 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 PCSK1NQ9UHG2 260 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 SLC25A13Q9UJS0 675 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 NEUROG3Q9Y4Z2 214 aa4.84□□□□□ -1.63
SCAF11-214ENST00000550893 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms