RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SLC41A2Q96JW4 573 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 TSNARE1Q96NA8 513 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 SH3GL2Q99962 352 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 SYNPO2LQ9H987 977 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 FAM60AQ9NP50 221 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CCDC177Q9NQR7 707 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CUEDC1Q9NWM3 386 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 OCIAD1Q9NX40 245 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 KLK13Q9UKR3 277 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 SLC22A14Q9Y267 594 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PLLPQ9Y342 182 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 KLK4Q9Y5K2 254 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 RASSF9O75901 435 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SIX3O95343 332 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-206ENST00000550406 MYZAPP0CAP1 466 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 NELFEP18615 380 aaKnown RBP12.55□□□□□ -0.4
RAB5C-206ENST00000550406 EPORP19235 508 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SPINK2P20155 84 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 MAGP20916 626 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 GRIA3P42263 894 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 GABRA4P48169 554 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 ALDH18A1P54886 795 aaKnown RBP12.55□□□□□ -0.4
RAB5C-206ENST00000550406 KCNAB1Q14722 419 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 ZNF425Q6IV72 752 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 CARFQ8N187 725 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 TCAIMQ8N3R3 496 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 GALNT15Q8N3T1 639 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 BMPERQ8N8U9 685 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 TCP10LQ8TDR4 215 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SLC22A18Q96BI1 424 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 PHF21BQ96EK2 531 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 MOCOSQ96EN8 888 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 LIN37Q96GY3 246 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-206ENST00000550406 CD244Q9BZW8 370 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SIDT1Q9NXL6 827 aaKnown RBP12.55□□□□□ -0.4
RAB5C-206ENST00000550406 WWOXQ9NZC7 414 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SENP1Q9P0U3 644 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 SLC17A7Q9P2U7 560 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
RAB5C-206ENST00000550406 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 A8MT66 165 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 STK16O75716 305 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 WDR47O94967 919 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 FKBP9O95302 570 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 ZBTB11O95625 1053 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 CCL4P13236 92 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 GFAPP14136 432 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 HGFP14210 728 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 FOLR1P15328 257 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 CCND1P24385 295 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 CMPK1P30085 196 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 ETV5P41161 510 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 SH3BP2P78314 561 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 PCBP2Q15366 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 THEMIS2Q5TEJ8 643 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 FBXO42Q6P3S6 717 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 RPS27LQ71UM5 84 aaKnown RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 D2HGDHQ8N465 521 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 DNAJC22Q8N4W6 341 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 PTGR2Q8N8N7 351 aaPredicted RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 GRAMD1AQ96CP6 724 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 DPH7Q9BTV6 452 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 PCBD2Q9H0N5 130 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 SSU72Q9NP77 194 aaKnown RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 MRPS30Q9NP92 439 aaKnown RBP12.54□□□□□ -0.4
RAB5C-206ENST00000550406 ACSS2Q9NR19 701 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 PILRAQ9UKJ1 303 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 ACTL7BQ9Y614 415 aa12.54□□□□□ -0.4
RAB5C-206ENST00000550406 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 OR2A25A4D2G3 310 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 EFCAB7A8K855 629 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 STX16-NPEPL1H3BU86 382 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 H7BY64 318 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 STX16O14662 325 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CCNT2O60583 730 aaKnown RBP12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CTSVO60911 334 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 SMIM24O75264 130 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CTSBP07858 339 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ADRB1P08588 477 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 EBLN1P0CF75 366 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CDH1P12830 882 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ITIH1P19827 911 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ATP5F1P24539 256 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-206ENST00000550406 ETV4P43268 484 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 HSD11B2P80365 405 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
RAB5C-206ENST00000550406 TTMPQ5BVD1 217 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms