RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ADORA3P0DMS8 318 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CKMT1AP12532 417 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 ITGA2P17301 1181 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 FPR1P21462 350 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 NKX3-2P78367 333 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 HOXC5Q00444 222 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 TIAL1Q01085 375 aaKnown RBP eCLIP11.8□□□□□ -0.52
VDR-208ENST00000550325 SCN1BQ07699 218 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 MFSD10Q14728 455 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CPSF6Q16630 551 aaKnown RBP eCLIP11.8□□□□□ -0.52
VDR-208ENST00000550325 FAM171A1Q5VUB5 890 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 TWF2Q6IBS0 349 aaKnown RBP11.8□□□□□ -0.52
VDR-208ENST00000550325 OVOS1Q6IE37 1185 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 DIRAS2Q96HU8 199 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
VDR-208ENST00000550325 CFL2Q9Y281 166 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 E9PAM4 449 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 BTN3A3O00478 584 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 PIRO00625 290 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 GPR39O43194 453 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 SH3BGRLO75368 114 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 RPP40O75818 363 aaKnown RBP11.8□□□□□ -0.52
VDR-208ENST00000550325 TNFRSF1BP20333 461 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 HOXA11P31270 313 aaPredicted RBP11.8□□□□□ -0.52
VDR-208ENST00000550325 PNPLA4P41247 253 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 HK3P52790 923 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CXCR4P61073 352 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CYP4F8P98187 520 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 CSTF3Q12996 717 aaKnown RBP11.8□□□□□ -0.52
VDR-208ENST00000550325 TIGD4Q8IY51 512 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 OR8H3Q8N146 312 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 HSH2DQ96JZ2 352 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
VDR-208ENST00000550325 GABRDO14764 452 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 STX7O15400 261 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 RFX2P48378 723 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 STC1P52823 247 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GTF2H2Q13888 395 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 YIF1BQ5BJH7 314 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 PM20D1Q6GTS8 502 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GTF2H2CQ6P1K8 395 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GOLGA7Q7Z5G4 137 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 MSRB3Q8IXL7 192 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 DACT3Q96B18 629 aaPredicted RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 SDHCQ99643 169 aaPredicted RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 KATNAL1Q9BW62 490 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 DERL2Q9GZP9 239 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ZC4H2Q9NQZ6 224 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 MS4A12Q9NXJ0 267 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 LRRC37AA6NMS7 1700 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 H3BRB1 525 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ARNTLO00327 626 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 RFXANKO14593 260 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 RGS14O43566 566 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ZNF780AO75290 641 aaPredicted RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 ACVR2AP27037 513 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 HOXA9P31269 272 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GRIK4Q16099 956 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 KDM4DQ6B0I6 523 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 PPP3R2Q96LZ3 170 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 CCDC115Q96NT0 180 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 NPAP1Q9NZP6 1156 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 KCNN3Q9UGI6 736 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 NDRG4Q9ULP0 352 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GPR182O15218 404 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ULK1O75385 1050 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 SOX3P41225 446 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 SLC9A3P48764 834 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 ARHGEF6Q15052 776 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 ZC3H12BQ5HYM0 836 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 APH1BQ8WW43 257 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 IMP4Q96G21 291 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 MGLLQ99685 303 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 FAM124BQ9H5Z6 455 aaPredicted RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 NSUN3Q9H649 340 aaKnown RBP11.79□□□□□ -0.52
VDR-208ENST00000550325 WWOXQ9NZC7 414 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
VDR-208ENST00000550325 LCHNA4D1U4 455 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 PDHXO00330 501 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 GFRA2O00451 464 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 E2F3O00716 465 aa11.78□□□□□ -0.52
VDR-208ENST00000550325 CACNG3O60359 315 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms