RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PRR35P0CG20 571 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 FBLP22087 321 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 AOAHP28039 575 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 CARSP49589 748 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 EMP2P54851 167 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 PRAMEP78395 509 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 KIF5AQ12840 1032 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 P3H1Q32P28 736 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 PTRHD1Q6GMV3 140 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 CNSTQ6PJW8 725 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ZNF534Q76KX8 674 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 NLRP9Q7RTR0 991 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 MRGPRGQ86SM5 289 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 LINC00523Q86TU6 105 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 TMEM139Q8IV31 216 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 UBL4BQ8N7F7 174 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 GSDMBQ8TAX9 411 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ZUFSPQ96AP4 578 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 CABS1Q96KC9 395 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 DESI2Q9BSY9 194 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 CARD6Q9BX69 1037 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 TSSK1BQ9BXA7 367 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ETNK1Q9HBU6 452 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ABCF3Q9NUQ8 709 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 MED13LQ71F56 2210 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 FITM1A5D6W6 292 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 SRPX2O60687 465 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 WISP2O76076 250 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 FTCDO95954 541 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 IFNB1P01574 187 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 ERVK-10P10266 1014 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 ETS1P14921 441 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 CXCR2P25025 360 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 MST1P26927 711 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 TDGF1P3P51864 188 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 CDH17Q12864 832 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 TMED2Q15363 201 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 SYT16Q17RD7 645 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 YOD1Q5VVQ6 348 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 ATG9BQ674R7 924 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 RPUSD3Q6P087 351 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 FBXO42Q6P3S6 717 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 TMEM207Q6UWW9 146 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 UNC5DQ6UXZ4 953 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 NDUFAF7Q7L592 441 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 SYCE1Q8N0S2 351 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 SPC24Q8NBT2 197 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 ITLN2Q8WWU7 325 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 ATG4AQ8WYN0 398 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 PSMF1Q92530 271 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 NR4A3Q92570 626 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 RAD51AP1Q96B01 352 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 FAM136AQ96C01 138 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 MMABQ96EY8 250 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 RUBCNLQ9H714 662 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 MARCH4Q9P2E8 410 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 TRPC4Q9UBN4 977 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 FAM169AQ9Y6X4 670 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 CACNA1CQ13936 2221 aa11.39□□□□□ -0.59
TRAFD1-205ENST00000548277 CSMD1Q96PZ7 3565 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 TRAV17A0A0B4J275 112 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 MIF4GDA9UHW6 222 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 IDSB3KWA1 339 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 TARM1B6A8C7 271 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 E7EVH7 732 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 H0YGG7 62 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 PCDH17O14917 1159 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 SLCO2B1O94956 709 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 C1orf105O95561 183 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 WDPCPO95876 746 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 STATHP02808 62 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 HEXBP07686 556 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ITGAMP11215 1152 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 COX6A1P12074 109 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ADRA1DP25100 572 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 PSMA3P25788 255 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 HTR1EP28566 365 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 PPARGP37231 505 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 TNFSF10P50591 281 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ARF3P61204 181 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 PMP22Q01453 160 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 SNX1Q13596 522 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ZXDCQ2QGD7 858 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF324BQ6AW86 544 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 SUSD1Q6UWL2 747 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 TXLNBQ8N3L3 684 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 RAB42Q8N4Z0 105 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 OTUD6BQ8N6M0 293 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 OR2L3Q8NG85 312 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 HAS2Q92819 552 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 RELTQ969Z4 430 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 ZNF285Q96NJ3 590 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 DPH7Q9BTV6 452 aa11.38□□□□□ -0.59
TRAFD1-205ENST00000548277 CHRAC1Q9NRG0 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms