RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ZNF304Q9HCX3 659 aa19.45■□□□□ 0.7
SSH1-207ENST00000547862 TREX1Q9NSU2 369 aa19.45■□□□□ 0.7
SSH1-207ENST00000547862 ABCF3Q9NUQ8 709 aa19.45■□□□□ 0.7
SSH1-207ENST00000547862 CNTRLQ7Z7A1 2325 aa19.45■□□□□ 0.7
SSH1-207ENST00000547862 CRYBG3Q68DQ2 2970 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 KPNA5O15131 536 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 CMPK1P30085 196 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 EEF1A2Q05639 463 aaKnown RBP19.44■□□□□ 0.7
SSH1-207ENST00000547862 FAAH2Q6GMR7 532 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 SUSD1Q6UWL2 747 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 RNF44Q7L0R7 432 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 ST6GALNAC3Q8NDV1 305 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 VPS50Q96JG6 964 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 MAGEB10Q96LZ2 347 aaPredicted RBP19.44■□□□□ 0.7
SSH1-207ENST00000547862 C10orf90Q96M02 699 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 IL22Q9GZX6 179 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 EIF2B3Q9NR50 452 aaKnown RBP19.44■□□□□ 0.7
SSH1-207ENST00000547862 C3orf18Q9UK00 162 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 OSGIN2Q9Y236 505 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 MRFAP1Q9Y605 127 aa19.44■□□□□ 0.7
SSH1-207ENST00000547862 CPAMD8Q8IZJ3 1885 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 A0A1W2PPV9 198 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 FITM1A5D6W6 292 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 TARM1B6A8C7 271 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 E2F3O00716 465 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 VAPBO95292 243 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 FKBP9O95302 570 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 ONECUT2O95948 504 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 F7P08709 466 aaPredicted RBP19.43■□□□□ 0.7
SSH1-207ENST00000547862 ZGLP1P0C6A0 271 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 RPS3P23396 243 aaKnown RBP eCLIP19.43■□□□□ 0.7
SSH1-207ENST00000547862 CCNFP41002 786 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 VWA2Q5GFL6 755 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 FAM180AQ6UWF9 173 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 KCNMB4Q86W47 210 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 LRRC6Q86X45 466 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 MPP5Q8N3R9 675 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 ZUFSPQ96AP4 578 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 MFSD3Q96ES6 412 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 ZFYVE21Q9BQ24 234 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 DPH7Q9BTV6 452 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 TSGA10Q9BZW7 698 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 BFARQ9NZS9 450 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 SPATA7Q9P0W8 599 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 ZNF282Q9UDV7 671 aaPredicted RBP19.43■□□□□ 0.7
SSH1-207ENST00000547862 CRYL1Q9Y2S2 319 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 CENPEQ02224 2701 aa19.43■□□□□ 0.7
SSH1-207ENST00000547862 WIPF3A6NGB9 483 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 VSTM2BA6NLU5 285 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 SRPX2O60687 465 aaPredicted RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 HPP00738 406 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 ARNTP27540 789 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 RPA3P35244 121 aaPredicted RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 TSFMP43897 325 aaKnown RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 CARSP49589 748 aaKnown RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 RPS6KA1Q15418 735 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 SIX1Q15475 284 aaPredicted RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 MUM1Q2TAK8 710 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 ISLR2Q6UXK2 745 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 RNF10Q8N5U6 811 aaKnown RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 CATSPER1Q8NEC5 780 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 OR2A1Q8NGT9 310 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 MAGEC3Q8TD91 643 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 NACC2Q96BF6 587 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 MRPS30Q9NP92 439 aaKnown RBP19.42■□□□□ 0.7
SSH1-207ENST00000547862 IL1RAPL1Q9NZN1 696 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 MYO9AB2RTY4 2548 aa19.42■□□□□ 0.7
SSH1-207ENST00000547862 ARHGEF33A8MVX0 844 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 E5RI56 91 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 H0YGG7 62 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 LRRTM2O43300 516 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 KLHL18O94889 574 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 F10P00742 488 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 KCNJ1P48048 391 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 VPS41P49754 854 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 ARF3P61204 181 aaPredicted RBP19.41■□□□□ 0.7
SSH1-207ENST00000547862 ARG2P78540 354 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 MFAP5Q13361 173 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 MRNIPQ6NTE8 343 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 IGFL2Q6UWQ7 119 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 SDCCAG8Q86SQ7 713 aaPredicted RBP19.41■□□□□ 0.7
SSH1-207ENST00000547862 SPNS2Q8IVW8 549 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 SIRT6Q8N6T7 355 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 PPFIBP2Q8ND30 876 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 HMGCLL1Q8TB92 370 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 LPGAT1Q92604 370 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 BARD1Q99728 777 aaKnown RBP19.41■□□□□ 0.7
SSH1-207ENST00000547862 PTGFRNQ9P2B2 879 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 GALPQ9UBC7 116 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 TRPC4Q9UBN4 977 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 TAC3Q9UHF0 121 aa19.41■□□□□ 0.7
SSH1-207ENST00000547862 ITPR2Q14571 2701 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 NSG1A0A0A6YYJ2 146 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 OR2A25A4D2G3 310 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 VPS26AO75436 327 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 CELA2AP08217 269 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 CHRM3P20309 590 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 NPY2RP49146 381 aa19.4■□□□□ 0.7
SSH1-207ENST00000547862 TLR1Q15399 786 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms