RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GMPPBQ9Y5P6 360 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 KCNE1BA0A087WTH5 132 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 TMEM247A6NEH6 219 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 CLDN25C9JDP6 229 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 CLIC1O00299 241 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 YY2O15391 372 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 FKBP9O95302 570 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 HALP42357 657 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 NSG1P42857 185 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 MAGEA2P43356 314 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 RXRGP48443 463 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 OCA2Q04671 838 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 TRIM16LQ309B1 348 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 PAGE2BQ5JRK9 111 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 RETSATQ6NUM9 610 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 NOXRED1Q6NXP6 359 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 ZNF783Q6ZMS7 281 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 FKBP9P1Q75LS8 142 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 ZNF540Q8NDQ6 660 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 COPS8Q99627 209 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 C2orf49Q9BVC5 232 aaPredicted RBP15.35■□□□□ 0.05
LDLR-204ENST00000545707 IL1RAPQ9NPH3 570 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 SIRT5Q9NXA8 310 aa15.35■□□□□ 0.05
LDLR-204ENST00000545707 PNMA8BQ9ULN7 279 aaPredicted RBP15.35■□□□□ 0.05
LDLR-204ENST00000545707 FPGTO14772 594 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 ADAM23O75077 832 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SERPINB7O75635 380 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 CCNDBP1O95273 360 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 NADKO95544 446 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 CDH3P22223 829 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 LHCGRP22888 699 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 AOAHP28039 575 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 AQP1P29972 269 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 HOXA9P31269 272 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 KIR3DL1P43629 444 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SREBF2Q12772 1141 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 LMAN2Q12907 356 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 CHCHD4Q8N4Q1 142 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 TTC29Q8NA56 475 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 ZBTB8BQ8NAP8 495 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 MTERF1Q99551 399 aaKnown RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 ATP13A3Q9H7F0 1226 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 STOML2Q9UJZ1 356 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SNX6Q9UNH7 406 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PMF1-BGLAPU3KQ54 211 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 EVPLLA8MZ36 301 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 M0R3G1 203 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PRRG1O14668 218 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 KCNK5O95279 499 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 NUDT7P0C024 238 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 ITGAMP11215 1152 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PRPS2P11908 318 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 AMD1P17707 334 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 HPCAL1P37235 193 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 CASP9P55211 416 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SLC35A2P78381 396 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PTSQ03393 145 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 GPR33Q49SQ1 333 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PDE12Q6L8Q7 609 aaKnown RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 Q6ZPB1 254 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 CYP2U1Q7Z449 544 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 GALNT13Q8IUC8 556 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 CCDC71Q8IV32 467 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 FBLIM1Q8WUP2 373 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 FOXJ1Q92949 421 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 VOPP1Q96AW1 172 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 TPD52L3Q96J77 140 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 ZNF641Q96N77 438 aaPredicted RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 ALPK1Q96QP1 1244 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PRM3Q9NNZ6 103 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 PALMDQ9NP74 551 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 INIPQ9NRY2 104 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 ZDHHC3Q9NYG2 299 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 TMPRSS11EQ9UL52 423 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SAMD4AQ9UPU9 718 aaKnown RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 BTBD3Q9Y2F9 522 aa15.34■□□□□ 0.05
LDLR-204ENST00000545707 SAMHD1Q9Y3Z3 626 aaKnown RBP15.34■□□□□ 0.05
LDLR-204ENST00000545707 GABARAPO95166 117 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 UGT8Q16880 541 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 RFX4Q33E94 735 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ZC3H12BQ5HYM0 836 aaKnown RBP15.33■□□□□ 0.04
LDLR-204ENST00000545707 KDM4DQ6B0I6 523 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ADNP2Q6IQ32 1131 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 NIPAL1Q6NVV3 410 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 RNF165Q6ZSG1 346 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 SYT12Q8IV01 421 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ZZZ3Q8IYH5 903 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 CRIPAKQ8N1N5 446 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ATG16L2Q8NAA4 619 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 TAMM41Q96BW9 452 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 CMTM7Q96FZ5 175 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 HSH2DQ96JZ2 352 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 DUSP21Q9H596 190 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 ZNF451Q9Y4E5 1061 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 PRRC2BQ5JSZ5 2229 aaKnown RBP15.33■□□□□ 0.04
LDLR-204ENST00000545707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.33■□□□□ 0.04
LDLR-204ENST00000545707 HIST1H2AGP0C0S8 130 aaPredicted RBP15.33■□□□□ 0.04
LDLR-204ENST00000545707 HIST1H2ADP20671 130 aa15.33■□□□□ 0.04
LDLR-204ENST00000545707 KDELR2P33947 212 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms