RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ZNF670Q9BS34 389 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 TRIM7Q9C029 511 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 DPEP2Q9H4A9 486 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 CATSPERBQ9H7T0 1116 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 AKIRIN1Q9H9L7 192 aaPredicted RBP6.52□□□□□ -1.37
LDHA-223ENST00000545215 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
LDHA-223ENST00000545215 TRMT1Q9NXH9 659 aaKnown RBP6.52□□□□□ -1.37
LDHA-223ENST00000545215 SIDT1Q9NXL6 827 aaKnown RBP6.52□□□□□ -1.37
LDHA-223ENST00000545215 GALNT8Q9NY28 637 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 OR12D3Q9UGF7 316 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 SLC25A13Q9UJS0 675 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 TINAGQ9UJW2 476 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 ADAMTS6Q9UKP5 1117 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 VANGL2Q9ULK5 521 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 FARSAQ9Y285 508 aaKnown RBP6.52□□□□□ -1.37
LDHA-223ENST00000545215 PCDHA3Q9Y5H8 950 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 LRP4O75096 1905 aa6.52□□□□□ -1.37
LDHA-223ENST00000545215 IGLV3-10A0A075B6K4 115 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CXorf51AA0A1B0GTR3 108 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 FAM237BA0A1B0GVD1 139 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 FAM170AA1A519 330 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CES2O00748 559 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CLDN4O14493 209 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 CLDN11O75508 207 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TPOP07202 933 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 FAM157CP0CG43 387 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 RAC2P15153 192 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TCP1P17987 556 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 BMP7P18075 431 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 PEX2P28328 305 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 PTPN7P35236 360 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 SERPINB6P35237 376 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 ARCN1P48444 511 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 MAPKAPK2P49137 400 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 PLK1P53350 603 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 MAZP56270 477 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 SRP54P61011 504 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 GNG11P61952 73 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 DSC2Q02487 901 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 RBPJQ06330 500 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TFDP2Q14188 446 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 KRT81Q14533 505 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CNN3Q15417 329 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 DLG2Q15700 870 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CR1LQ2VPA4 569 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TMEM95Q3KNT9 176 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 ZNF569Q5MCW4 686 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 Q5PR19 223 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 ZFYVE27Q5T4F4 411 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 FBXL22Q6P050 247 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 FAM199XQ6PEV8 388 aaPredicted RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 LIPIQ6XZB0 460 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 ZNF783Q6ZMS7 281 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 BZW1Q7L1Q6 419 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 LRRC49Q8IUZ0 686 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 KCTD6Q8NC69 237 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 MAIP1Q8WWC4 291 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 HDAC10Q969S8 669 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TBC1D31Q96DN5 1066 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 HES6Q96HZ4 224 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 SGCZQ96LD1 299 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 NAP1L3Q99457 506 aaPredicted RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 PRMT1Q99873 361 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 SNRNP25Q9BV90 132 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 ZYG11BQ9C0D3 744 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CARD9Q9H257 536 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 DHX35Q9H5Z1 703 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 DMRT3Q9NQL9 472 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.51□□□□□ -1.37
LDHA-223ENST00000545215 TRIM10Q9UDY6 481 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 PCSK1NQ9UHG2 260 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 VPS28Q9UK41 221 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 TFR2Q9UP52 801 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 HS3ST4Q9Y661 456 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 CFAP20Q9Y6A4 193 aaKnown RBP6.51□□□□□ -1.37
LDHA-223ENST00000545215 GTF3C1Q12789 2109 aa6.51□□□□□ -1.37
LDHA-223ENST00000545215 LRRD1A4D1F6 860 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 CTAGE9A4FU28 777 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TRIM64A6NGJ6 449 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 IGLON5A6NGN9 336 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 TRIM64BA6NI03 449 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 EEF2KO00418 725 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 KPNA3O00505 521 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 SOCS6O14544 535 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 DAPK3O43293 454 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SLC19A2O60779 497 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 SEC24DO94855 1032 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 KRT1P04264 644 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 BRAFP15056 766 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 KDELR1P24390 212 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 APEX1P27695 318 aaKnown RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 IL1R2P27930 398 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 EPHB2P29323 1055 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 PEX5P50542 639 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 IRAK1P51617 712 aa6.5□□□□□ -1.37
LDHA-223ENST00000545215 GTF2A1P52655 376 aaPredicted RBP6.5□□□□□ -1.37
LDHA-223ENST00000545215 CDH4P55283 916 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms