RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 DENND5AQ6IQ26 1287 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 PRMT9Q6P2P2 845 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 TUBA3EQ6PEY2 450 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 TMEM205Q6UW68 189 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 Q71RC1 249 aaPredicted RBP8.91□□□□□ -0.98
CHD4-212ENST00000545083 VRK3Q8IV63 474 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
CHD4-212ENST00000545083 HAUS1Q96CS2 278 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 SCMH1Q96GD3 660 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 QKIQ96PU8 341 aaKnown RBP eCLIP8.91□□□□□ -0.98
CHD4-212ENST00000545083 NPAS2Q99743 824 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 MDFIQ99750 246 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 ZNF559Q9BR84 538 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 GBA3Q9H227 469 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 LIME1Q9H400 295 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 SYNPO2LQ9H987 977 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 SMARCAL1Q9NZC9 954 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 TRPC4Q9UBN4 977 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
CHD4-212ENST00000545083 COL6A5A8TX70 2615 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 IGHV3-20A0A0C4DH32 117 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 KRT87PA6NCN2 255 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 CST8O60676 142 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SRPX2O60687 465 aaPredicted RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 SEC24DO94855 1032 aaPredicted RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 TOXO94900 526 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 AP2A2O94973 939 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 TSPAN12O95859 305 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SERPING1P05155 500 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 EIF2S1P05198 315 aaKnown RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 HEXBP07686 556 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 H2AFZP0C0S5 128 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 MYBL2P10244 700 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 TNNT1P13805 278 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 MSX1P28360 303 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 CD96P40200 585 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 GEMP55040 296 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 YBX1P67809 324 aaKnown RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 DSG2Q14126 1118 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 OR1C1Q15619 314 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 CEBPEQ15744 281 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 STX1AQ16623 288 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 TAZQ16635 292 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SYT16Q17RD7 645 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 MUM1Q2TAK8 710 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 PRTGQ2VWP7 1150 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 FIGNQ5HY92 759 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SPINK14Q6IE38 97 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 LANCL3Q6ZV70 420 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 H2AFVQ71UI9 128 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 RNF44Q7L0R7 432 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 GALNTL5Q7Z4T8 443 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 ZC3H7AQ8IWR0 971 aaKnown RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 SHISA5Q8N114 240 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 GHDCQ8N2G8 530 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 AMER3Q8N944 861 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 OR2L8Q8NGY9 312 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 SLC22A18Q96BI1 424 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 VAT1Q99536 393 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 SMR3AQ99954 134 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 INTS7Q9NVH2 962 aaKnown RBP8.9□□□□□ -0.98
CHD4-212ENST00000545083 COQ3Q9NZJ6 369 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 IMPACTQ9P2X3 320 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 HYOU1Q9Y4L1 999 aa8.9□□□□□ -0.98
CHD4-212ENST00000545083 HCFC1P51610 2035 aa8.9□□□□□ -0.99
CHD4-212ENST00000545083 HRNRQ86YZ3 2850 aaPredicted RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 OR51F1A6NGY5 319 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 FOXO6A8MYZ6 492 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TARM1B6A8C7 271 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 H7C0S8 307 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 PRRG2O14669 202 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 KDM1AO60341 852 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 ANXA9O76027 345 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 MLYCDO95822 493 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 HOXD4P09016 255 aaPredicted RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 ICAM2P13598 275 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 PSMB4P28070 264 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 RBL1P28749 1068 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 EEF1DP29692 281 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 PTGER1P34995 402 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 SLC26A3P40879 764 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 SNRPNP63162 240 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 MAT1AQ00266 395 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 FOLH1Q04609 750 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TYRO3Q06418 890 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 FASTKQ14296 549 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 SPARCL1Q14515 664 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 SYTL3Q4VX76 610 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 ACER2Q5QJU3 275 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 KAZNQ674X7 775 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 H3F3CQ6NXT2 135 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 BZW1Q7L1Q6 419 aaKnown RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.89□□□□□ -0.99
CHD4-212ENST00000545083 CRLF3Q8IUI8 442 aa8.89□□□□□ -0.99
CHD4-212ENST00000545083 TMTC1Q8IUR5 882 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms