RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 THOC6Q86W42 341 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 OR2L3Q8NG85 312 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 ESAMQ96AP7 390 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 PHF21BQ96EK2 531 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 L3HYPDHQ96EM0 354 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 MED8Q96G25 268 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 GFM1Q96RP9 751 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 KCNK9Q9NPC2 374 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 C1GALT1Q9NS00 363 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 OXSMQ9NWU1 459 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 SLC22A14Q9Y267 594 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 KLK4Q9Y5K2 254 aa12.62□□□□□ -0.39
DDX11-227ENST00000544652 TNPO3Q9Y5L0 923 aaKnown RBP12.62□□□□□ -0.39
DDX11-227ENST00000544652 GSAPA4D1B5 854 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 TLCD2A6NGC4 264 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 K7EPI3 171 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 GIPC1O14908 333 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 WDR47O94967 919 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 SIX3O95343 332 aaPredicted RBP12.61□□□□□ -0.39
DDX11-227ENST00000544652 ANKRD34CP0C6C1 535 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 THRAP10827 490 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 IMPDH1P20839 514 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 GDF5P43026 501 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 LSSP48449 732 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 PDX1P52945 283 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 HERVK_113P63132 956 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 ABATP80404 500 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
DDX11-227ENST00000544652 PCDH1Q08174 1060 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 SPIDRQ14159 915 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 E2F2Q14209 437 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 FBXO48Q5FWF7 155 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 ZNF678Q5SXM1 525 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 ICE2Q659A1 982 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 PRSS42Q7Z5A4 293 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 TAX1BP1Q86VP1 789 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 SLITRK4Q8IW52 837 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 CCDC63Q8NA47 563 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 HAUS8Q9BT25 410 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 GPRC5BQ9NZH0 403 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 TMEM9Q9P0T7 183 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 TAC3Q9UHF0 121 aa12.61□□□□□ -0.39
DDX11-227ENST00000544652 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
DDX11-227ENST00000544652 GVINP1Q7Z2Y8 2422 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 IGHV5-10-1A0A0J9YXX1 117 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 A0A0J9YY10 115 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 POM121CA8CG34 1229 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 BIRC5O15392 142 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 CCNDBP1O95273 360 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 BPGMP07738 259 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 EPORP19235 508 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 EEF1DP29692 281 aaKnown RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 CMPK1P30085 196 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 SERPINB4P48594 390 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 WDR4P57081 412 aaKnown RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 NAA20P61599 178 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 YBX1P67809 324 aaKnown RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 CDC16Q13042 620 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 SF1Q15637 639 aaKnown RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 UNC50Q53HI1 259 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 LIPMQ5VYY2 423 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 KIAA1614Q5VZ46 1190 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 ZNF425Q6IV72 752 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 IRGCQ6NXR0 463 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 ARHGAP22Q7Z5H3 698 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 RAB44Q7Z6P3 723 aaPredicted RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 C10orf107Q8IVU9 208 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 OR6Y1Q8NGX8 325 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 ZNF483Q8TF39 744 aaPredicted RBP12.6□□□□□ -0.39
DDX11-227ENST00000544652 KLHL6Q8WZ60 621 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 TGM7Q96PF1 710 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 TRAPPC9Q96Q05 1148 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 TMEM237Q96Q45 408 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 MAP3K3Q99759 626 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 CAPS2Q9BXY5 557 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 CHRNA10Q9GZZ6 450 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 SEMA6CQ9H3T2 930 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 SLC6A20Q9NP91 592 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 DNAJC11Q9NVH1 559 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 ANKMY1Q9P2S6 941 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 OPTCQ9UBM4 332 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 PCTPQ9UKL6 214 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 SH2B3Q9UQQ2 575 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 KCNE2Q9Y6J6 123 aa12.6□□□□□ -0.39
DDX11-227ENST00000544652 IGKV1-8A0A0C4DH67 115 aa12.59□□□□□ -0.39
DDX11-227ENST00000544652 H3BQF6 201 aa12.59□□□□□ -0.39
DDX11-227ENST00000544652 KIF1CO43896 1103 aaKnown RBP12.59□□□□□ -0.39
DDX11-227ENST00000544652 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
DDX11-227ENST00000544652 TRIM13O60858 407 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms