RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 IL17FQ96PD4 163 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 ABCG2Q9UNQ0 655 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 PCDHB3Q9Y5E6 796 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 PCDHGA8Q9Y5G5 932 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 ARHGEF33A8MVX0 844 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 RFXANKO14593 260 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 INTS11Q5TA45 600 aaKnown RBP15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SPRED1Q7Z699 444 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 ZDHHC13Q8IUH4 622 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SYT12Q8IV01 421 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 OR4K1Q8NGD4 311 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 DUS3LQ96G46 650 aaKnown RBP15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 PANX1Q96RD7 426 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 HERC2P3Q9BVR0 1158 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 MRGBPQ9NV56 204 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 CREG1O75629 220 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SLC16A8O95907 504 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 FTH1P02794 183 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 CDH1P12830 882 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 LAG3P18627 525 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 WASP42768 502 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 KCNAB2Q13303 367 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 Q6ZPB1 254 aaPredicted RBP15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 ADIPOR2Q86V24 386 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SMYD1Q8NB12 490 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 BPIFB1Q8TDL5 484 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SDCCAG3Q96C92 435 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 ISOC1Q96CN7 298 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SORBS1Q9BX66 1292 aaKnown RBP15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SH3BP4Q9P0V3 963 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 SLC8A2Q9UPR5 921 aa15.32■□□□□ 0.04
SNRNP70-203ENST00000544278 LAMA1P25391 3075 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 BRWD1Q9NSI6 2320 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 PRR23AA6NEV1 266 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 DEAF1O75398 565 aaPredicted RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 FKBP9O95302 570 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 RHOP08100 348 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 CLTBP09497 229 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 LAMP1P11279 417 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MSH3P20585 1137 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MYF6P23409 242 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 PTGER1P34995 402 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 PPP3CCP48454 512 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 SH3BGRP55822 239 aaPredicted RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 BNIP3Q12983 259 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 UAP1L1Q3KQV9 507 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 SYTL3Q4VX76 610 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 CATSPEREQ5SY80 951 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 ABRAXAS1Q6UWZ7 409 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 FKBP9P1Q75LS8 142 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 RIMKLAQ8IXN7 391 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MMP21Q8N119 569 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 SERHLQ9NQF3 203 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 WARS2Q9UGM6 360 aaKnown RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MAGEL2Q9UJ55 1249 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MAGEB17A8MXT2 336 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 EBLN1P0CF75 366 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 THRBP10828 461 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 ZNF182P17025 639 aaPredicted RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 TMED10P49755 219 aaKnown RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 MC1RQ01726 317 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 ZNF362Q5T0B9 420 aaPredicted RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 CEP68Q76N32 757 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 ZNF740Q8NDX6 193 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 IRF7Q92985 503 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 NPLQ9BXD5 320 aaPredicted RBP15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 AMBNQ9NP70 447 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 TDP1Q9NUW8 608 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 ACSL6Q9UKU0 697 aa15.31■□□□□ 0.04
SNRNP70-203ENST00000544278 SOCS5O75159 536 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 ARHGEF15O94989 841 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 POP4O95707 220 aaKnown RBP15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RAP2AP10114 183 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 MATN1P21941 496 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■□□ 17.3
SNRNP70-203ENST00000544278 FMO3P31513 532 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 FOXM1Q08050 763 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 DAG1Q14118 895 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 SMN1Q16637 294 aaKnown RBP15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 CTU2Q2VPK5 515 aaKnown RBP15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 ANKRD33Q7Z3H0 272 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 R3HCC1LQ7Z5L2 792 aaKnown RBP15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 DPP10Q8N608 796 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RASGEF1AQ8N9B8 481 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 MFSD2AQ8NA29 543 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 OR5AK3PQ8NH89 298 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 OSCP1Q8WVF1 389 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 ASB11Q8WXH4 323 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 LZICQ8WZA0 190 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RIBC2Q9H4K1 309 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 CLMPQ9H6B4 373 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RASSF1Q9NS23 344 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 RAPGEFL1Q9UHV5 662 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 OGDHLQ9ULD0 1010 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 GSTT2P0CG29 244 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 GSTT2BP0CG30 244 aa15.3■□□□□ 0.04
SNRNP70-203ENST00000544278 COX7A2P14406 83 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms