RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 CATSPERDQ86XM0 798 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SLC39A11Q8N1S5 342 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 METTL4Q8N3J2 472 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SLC37A3Q8NCC5 494 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SKA1Q96BD8 255 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SLC22A18Q96BI1 424 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SLC45A3Q96JT2 553 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 SEPHS2Q99611 448 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 PANK2Q9BZ23 570 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 PUS3Q9BZE2 481 aaKnown RBP2.78□□□□□ -1.96
CCDC170-203ENST00000544131 NYXQ9GZU5 481 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 TLE6Q9H808 572 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 CHST11Q9NPF2 352 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 VPS28Q9UK41 221 aa2.78□□□□□ -1.96
CCDC170-203ENST00000544131 IGLV3-10A0A075B6K4 115 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 NEMP2A6NFY4 417 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 A8MXK9 166 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 ARPC2O15144 300 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 ENTPD3O75355 529 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PFKFB1P16118 471 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PAX3P23760 479 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PDHA2P29803 388 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 SOX3P41225 446 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 ZNF75DP51815 510 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 HSPB3Q12988 150 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 CDH18Q13634 790 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 WTAPQ15007 396 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PHKG1Q16816 387 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 MCMDC2Q4G0Z9 681 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 RILPL1Q5EBL4 403 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 NOTUMQ6P988 496 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 CHMP1BQ7LBR1 199 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 NUP54Q7Z3B4 507 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 HPS6Q86YV9 775 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 C11orf53Q8IXP5 236 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 RPAP2Q8IXW5 612 aaPredicted RBP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 POM121L12Q8N7R1 296 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 OR7A2PQ8NGA2 310 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 JAKMIP2Q96AA8 810 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PTERQ96BW5 349 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 ATXN7L3BQ96GX2 97 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 PDLIM5Q96HC4 596 aaKnown RBP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 LPAR4Q99677 370 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 RPP25Q9BUL9 199 aaKnown RBP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 TDRD1Q9BXT4 1180 aaKnown RBP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 MYNNQ9NPC7 610 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 BLOC1S4Q9NUP1 217 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 GIMAP4Q9NUV9 329 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 TBC1D29Q9UFV1 150 aa2.77□□□□□ -1.97
CCDC170-203ENST00000544131 ABT1Q9ULW3 272 aaKnown RBP2.77□□□□□ -1.97
CCDC170-203ENST00000544131 LOC105371242A0A075B767 164 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 SRRM5B3KS81 715 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 H0YAE9 185 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 DNAH10OSP0CZ25 163 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CAPGP40121 348 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 MTHFRP42898 656 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 RXRGP48443 463 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 HNRNPKP61978 463 aaKnown RBP eCLIP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 MYL7Q01449 175 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 KLC1Q07866 573 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CD300CQ08708 224 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 VEZF1Q14119 521 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 TMEM132DQ14C87 1099 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 FAM189A2Q15884 450 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CBWD6Q4V339 395 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CBWD3Q5JTY5 395 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 FAM205BPQ63HN1 556 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 ITPRIPL1Q6GPH6 555 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 LEKR1Q6ZMV7 388 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CERS3Q8IU89 383 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 ABHD12Q8N2K0 398 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 MINDY1Q8N5J2 469 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 C17orf47Q8NEP4 570 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 OR4K1Q8NGD4 311 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 OR10S1Q8NGN2 331 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CFAP61Q8NHU2 1237 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 ZPLD1Q8TCW7 415 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 LRRC15Q8TF66 581 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CHPT1Q8WUD6 406 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 ZNF622Q969S3 477 aaKnown RBP eCLIP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 TMCO6Q96DC7 493 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CNRIP1Q96F85 164 aaPredicted RBP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 RSRC1Q96IZ7 334 aaKnown RBP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 C4orf45Q96LM5 186 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 TREX2Q9BQ50 279 aaPredicted RBP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 ZNF577Q9BSK1 485 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 PCDHGB4Q9UN71 923 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 PA2G4Q9UQ80 394 aaKnown RBP2.76□□□□□ -1.97
CCDC170-203ENST00000544131 CHKBQ9Y259 395 aa2.76□□□□□ -1.97
CCDC170-203ENST00000544131 A0A087WUV0 522 aaPredicted RBP2.75□□□□□ -1.97
CCDC170-203ENST00000544131 ACOD1A6NK06 481 aa2.75□□□□□ -1.97
CCDC170-203ENST00000544131 TFECO14948 347 aaPredicted RBP2.75□□□□□ -1.97
CCDC170-203ENST00000544131 TEX28O15482 410 aa2.75□□□□□ -1.97
CCDC170-203ENST00000544131 POP4O95707 220 aaKnown RBP2.75□□□□□ -1.97
CCDC170-203ENST00000544131 OXTRP30559 389 aa2.75□□□□□ -1.97
CCDC170-203ENST00000544131 DNA2P51530 1060 aa2.75□□□□□ -1.97
CCDC170-203ENST00000544131 ZFP36L1Q07352 338 aaKnown RBP2.75□□□□□ -1.97
CCDC170-203ENST00000544131 EPS8Q12929 822 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms