RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 GLRA4Q5JXX5 417 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 CYB5D1Q6P9G0 228 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 IYDQ6PHW0 289 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 C9orf139Q6ZV77 190 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 ISCA2Q86U28 154 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 NFE4Q86UQ8 179 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 AMIGO1Q86WK6 493 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 EID3Q8N140 333 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 ZNF383Q8NA42 475 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 HSD17B8Q92506 261 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 SCRN2Q96FV2 425 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 PARK7Q99497 189 aaKnown RBP3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 PKP4Q99569 1192 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 CACNG6Q9BXT2 260 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 BICC1Q9H694 974 aaKnown RBP3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 ZBTB20Q9HC78 741 aaPredicted RBP3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 GSN-AS1Q9NRJ2 163 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 ZNF701Q9NV72 531 aaPredicted RBP3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 DONSONQ9NYP3 566 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 LIPT1Q9Y234 373 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 SNX5Q9Y5X3 404 aa3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 TCF20Q9UGU0 1960 aaKnown RBP3.25□□□□□ -1.89
GTF2H3-209ENST00000542279 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CASTOR2A6NHX0 329 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 F8VVB4 439 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 F8VWA3 439 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 SLC30A4O14863 429 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ZNF263O14978 683 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 FLRT2O43155 660 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CIDEAO60543 219 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 PRAF2O60831 178 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 GOSR1O95249 250 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 PIGNO95427 931 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ATP6V1B1P15313 513 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ITIH1P19827 911 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CCND3P30281 292 aaPredicted RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 TIA1P31483 386 aaKnown RBP eCLIP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 RPL21P46778 160 aaKnown RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 VAMP7P51809 220 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CLDN15P56746 228 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ERVFC1-1P60608 527 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 KLC1Q07866 573 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 RASGEF1BQ0VAM2 473 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 SMU1Q2TAY7 513 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 IQCCQ4KMZ1 466 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 WDR38Q5JTN6 314 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 SLC10A5Q5PT55 438 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CYP4A22Q5TCH4 519 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 FAM46CQ5VWP2 391 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 NOTUMQ6P988 496 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 GDPD4Q6W3E5 623 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 LINC00696Q6ZRV3 163 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 PIGWQ7Z7B1 504 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 C4orf19Q8IY42 314 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 APCDD1Q8J025 514 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CIARTQ8N365 385 aaPredicted RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 C10orf53Q8N6V4 93 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CCDC63Q8NA47 563 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 DBF4BQ8NFT6 615 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 AFAP1L1Q8TED9 768 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 PHLDA1Q8WV24 401 aaPredicted RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 SEPT1Q8WYJ6 367 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 PTP4A1Q93096 173 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 TSACCQ96A04 125 aaPredicted RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 AK8Q96MA6 479 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 HNRNPABQ99729 332 aaKnown RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 CCDC3Q9BQI4 270 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ZMYND12Q9H0C1 365 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 SDR39U1Q9NRG7 319 aaPredicted RBP3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 FGF21Q9NSA1 209 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 ZFP57Q9NU63 452 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 P4HTMQ9NXG6 502 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 GMEB2Q9UKD1 530 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 TNNQ9UQP3 1299 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 TRIM17Q9Y577 477 aa3.24□□□□□ -1.89
GTF2H3-209ENST00000542279 TRIM64A6NGJ6 449 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 TRIM64BA6NI03 449 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 C2orf81A6NN90 581 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 CCL24O00175 119 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 ZNF197O14709 1029 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 CTDSPLO15194 276 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 PRKRAO75569 313 aaKnown RBP3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 TSHBP01222 138 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 CRYAAP02489 173 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 C9P02748 559 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 SERPING1P05155 500 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 IGHV4-38-2P0DP08 117 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 EEF2P13639 858 aaKnown RBP3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 DARSP14868 501 aaKnown RBP3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 LIFP15018 202 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 CSTF2P33240 577 aaKnown RBP eCLIP3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 HNF4AP41235 474 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 NKX2-1P43699 371 aaPredicted RBP3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 ALDH3A2P51648 485 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 LBX1P52954 281 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 GAS1P54826 345 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 ST8SIA6P61647 398 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 UBXN1Q04323 297 aa3.23□□□□□ -1.89
GTF2H3-209ENST00000542279 ILF3Q12906 894 aaKnown RBP eCLIP3.23□□□□□ -1.892e-6■■■■□ 20.1
GTF2H3-209ENST00000542279 SQLEQ14534 574 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms