RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SH3GL1Q99961 368 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 MYOCQ99972 504 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 ATP13A3Q9H7F0 1226 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 FBXO8Q9NRD0 319 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SELENONQ9NZV5 590 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 ERVW-1Q9UQF0 538 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 GLYATL1P3A0A0U1RQE8 302 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 CLDN9O95484 217 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 BMP4P12644 408 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 EPB42P16452 691 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 AMD1P17707 334 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 TGM1P22735 817 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 LHCGRP22888 699 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 AOAHP28039 575 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 TGFBR1P36897 503 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 RGS4P49798 205 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SEMG2Q02383 582 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 FAHD1Q6P587 224 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SERPINA11Q86U17 422 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 MCOLN3Q8TDD5 553 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 UBE2FQ969M7 185 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SDCCAG3Q96C92 435 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 CAPNS2Q96L46 248 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 PITX2Q99697 317 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 EGFL8Q99944 293 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 AP3M1Q9Y2T2 418 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 PTGES3LE9PB15 166 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 GCM2O75603 506 aaPredicted RBP9.27□□□□□ -0.93
CNOT4-212ENST00000541284 FTH1P02794 183 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 MT-ND2P03891 347 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 ACPPP15309 386 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 IGFBP5P24593 272 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 LIMK1P53667 647 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 VAC14Q08AM6 782 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 CPSF6Q16630 551 aaKnown RBP eCLIP9.27□□□□□ -0.93
CNOT4-212ENST00000541284 DGKKQ5KSL6 1271 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 CDKL4Q5MAI5 379 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 C16orf87Q6PH81 154 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 CRTC1Q6UUV9 634 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 LINC00299Q6ZSB3 139 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 LRRC8DQ7L1W4 858 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 FAM120BQ96EK7 910 aaKnown RBP9.27□□□□□ -0.93
CNOT4-212ENST00000541284 C7orf34Q96L11 122 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SLIRPQ9GZT3 109 aaKnown RBP9.27□□□□□ -0.93
CNOT4-212ENST00000541284 SLC32A1Q9H598 525 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 BACE2Q9Y5Z0 518 aa9.27□□□□□ -0.93
CNOT4-212ENST00000541284 KRBA1A5PL33 1030 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 SGTAO43765 313 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 ANGPTL1O95841 491 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 SELPP16109 830 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 GPX2P18283 190 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 RXRGP48443 463 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 CSNK1DP48730 415 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 CXCR4P61073 352 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 ITGADQ13349 1161 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 OR4F3Q6IEY1 312 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 DOK6Q6PKX4 331 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 VTCN1Q7Z7D3 282 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 GPR65Q8IYL9 337 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 NRBF2Q96F24 287 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 TSSK3Q96PN8 268 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 ZNF334Q9HCZ1 680 aaPredicted RBP9.26□□□□□ -0.93
CNOT4-212ENST00000541284 TM9SF3Q9HD45 589 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 TBX21Q9UL17 535 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 BTBD3Q9Y2F9 522 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 CLDN25C9JDP6 229 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 TOR1BO14657 336 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 NOL3O60936 208 aaKnown RBP9.26□□□□□ -0.93
CNOT4-212ENST00000541284 DIRAS1O95057 198 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 LATS1O95835 1130 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 ITGALP20701 1170 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 KRT20P35900 424 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 PLD1Q13393 1074 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 MAD2L1BPQ15013 274 aaPredicted RBP9.26□□□□□ -0.93
CNOT4-212ENST00000541284 NPTX1Q15818 432 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 RFX4Q33E94 735 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 CATSPEREQ5SY80 951 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 OR2T5Q6IEZ7 315 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 FAM124AQ86V42 546 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 OR2T29Q8NH02 315 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 ECHDC3Q96DC8 303 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 CMTM7Q96FZ5 175 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 PSD2Q9BQI7 771 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 KLHL42Q9P2K6 505 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 PPIL1Q9Y3C6 166 aa9.26□□□□□ -0.93
CNOT4-212ENST00000541284 RECQL5O94762 991 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CCNDBP1O95273 360 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PRPS2P11908 318 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 CYP4B1P13584 511 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ALDH4A1P30038 563 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 SPAM1P38567 509 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 RAD23AP54725 363 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 C21orf58P58505 322 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 PTSQ03393 145 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 SIM2Q14190 667 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-212ENST00000541284 GPR33Q49SQ1 333 aa9.25□□□□□ -0.93
CNOT4-212ENST00000541284 ATP13A5Q4VNC0 1218 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms