RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CSRP3P50461 194 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 AFF1P51825 1210 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 EEFSECP57772 596 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SCN1BQ07699 218 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 GRIK2Q13002 908 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 MAB21L1Q13394 359 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ORC1Q13415 861 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 GBX1Q14549 363 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF79Q15937 498 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CLLU1Q5K131 121 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 HEATR6Q6AI08 1181 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 DENND1BQ6P3S1 775 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ALKAL1Q6UXT8 129 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CUZD1Q86UP6 607 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CYP4Z2PQ8N1L4 340 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SPATA6LQ8N4H0 392 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 GDPD1Q8N9F7 314 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SETD9Q8NE22 299 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 DBF4BQ8NFT6 615 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 OR7G3Q8NG95 312 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM149B1Q96BN6 582 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 C3orf30Q96M34 536 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 LINC00052Q96N35 136 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR78Q96P69 363 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM129BQ96TA1 746 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 MS4A7Q9GZW8 240 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SPATA6Q9NWH7 488 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 DNAJB9Q9UBS3 223 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CYTH4Q9UIA0 394 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 MAPRE3Q9UPY8 281 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 V9GYH0 126 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 BTN3A1O00481 513 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 PPP6CO00743 305 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SSX5O60225 188 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SUPT7LO94864 414 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 WDPCPO95876 746 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CST1P01037 141 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 FCER2P06734 321 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC35E2BP0CK96 405 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ZP3P21754 424 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CLCNKAP51800 687 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 RBP5P82980 135 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 FLI1Q01543 452 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR139Q6DWJ6 353 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 CLEC6AQ6EIG7 209 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 AHSA2Q719I0 299 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC46A3Q7Z3Q1 461 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 DCP1BQ8IZD4 617 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 UBE2J2Q8N2K1 259 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 SVOPLQ8N434 492 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 C1orf127Q8N9H9 656 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 OR6M1Q8NGM8 313 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ITFG1Q8TB96 612 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ATOH1Q92858 354 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 YIPF5Q969M3 257 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 C18orf25Q96B23 403 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 KIF12Q96FN5 646 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 RADILQ96JH8 1075 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 VAT1Q99536 393 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 HPF1Q9NWY4 346 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEFF2Q9UIK5 374 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 RAB23Q9ULC3 237 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEM5Q9Y2B1 443 aa9.23□□□□□ -0.93
CTNNA1-243ENST00000540387 A0A0U1RQF3 1178 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 WASHC1A8K0Z3 465 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 STX16O14662 325 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MRPS14O60783 128 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MITFO75030 526 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 NDUFS6O75380 124 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 RAF1P04049 648 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC2A3P11169 496 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 NRIP1P48552 1158 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MAPKAPK2P49137 400 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ARHGDIBP52566 201 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CDH13P55290 713 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 KCNK10P57789 538 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MYL6P60660 151 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 PCDH1Q08174 1060 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 USP10Q14694 798 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEM132DQ14C87 1099 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 ANGPT1Q15389 498 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TIGD6Q17RP2 521 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TUSC1Q2TAM9 212 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CYP27C1Q4G0S4 372 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC35F1Q5T1Q4 408 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 DBX2Q6ZNG2 339 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM183BPQ6ZVS7 135 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEM179BQ7Z7N9 219 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 GALNT10Q86SR1 603 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 MIER2Q8N344 545 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM86B1Q8N7N1 296 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SMG7Q92540 1137 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 AP2M1Q96CW1 435 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 C19orf60Q96EN9 201 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 SIGLEC11Q96RL6 698 aa9.22□□□□□ -0.93
CTNNA1-243ENST00000540387 CHCHD6Q9BRQ6 235 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms