RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 AMD1P17707 334 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRDX3P30048 256 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GPR3P46089 330 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PIK3CGP48736 1102 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 EPHA4P54764 986 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR1D5P58170 312 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NAA20P61599 178 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CDC16Q13042 620 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 LCP2Q13094 533 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PERM1Q5SV97 790 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRAMEF9Q5VWM5 478 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NAXDQ8IW45 347 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 FLVCR1-AS1Q8TAF5 88 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NEIL2Q969S2 332 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SORT1Q99523 831 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TRMOQ9BU70 441 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CAPS2Q9BXY5 557 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SLCO1B3Q9NPD5 702 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 KCNK4Q9NYG8 393 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ZNF225Q9UK10 706 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PCDHB11Q9Y5F2 797 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 KCNE2Q9Y6J6 123 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
TNFRSF1A-213ENST00000540022 IGHV1OR21-1A0A087WYE8 117 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TCP11X1B4DZS4 312 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CBFA2T3O75081 653 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 HSPA4LO95757 839 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PROS1P07225 676 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CEACAM1P13688 526 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SERPINB5P36952 375 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 DAB2P98082 770 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OCRLQ01968 901 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 KIR2DS3Q14952 304 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PIP4P1Q86T03 277 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OOSP2Q86WS3 158 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 FAM20CQ8IXL6 584 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 DCBLD1Q8N8Z6 715 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 Q8N9G6 341 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 DEFB124Q8NES8 71 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR2A14Q96R47 310 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PCBD2Q9H0N5 130 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TNFRSF12AQ9NP84 129 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 THAP1Q9NVV9 213 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ACTR10Q9NZ32 417 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GPRC5BQ9NZH0 403 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GSAPA4D1B5 854 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 E7EQ34 232 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CASC3O15234 703 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 KATNA1O75449 491 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 MLYCDO95822 493 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PNLIPP16233 465 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CAPZBP47756 277 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PPP1CAP62136 330 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SH3BP2P78314 561 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GALNT1Q10472 559 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 TRAF3Q13114 568 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 RBBP7Q16576 425 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NKAIN2Q5VXU1 208 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 FAM219BQ5XKK7 198 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ICE2Q659A1 982 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 KLHL35Q6PF15 583 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 FAM47EQ6ZV65 393 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 EFL1Q7Z2Z2 1120 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ATP6V1E2Q96A05 226 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CNDP2Q96KP4 475 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CDK15Q96Q40 435 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ZNF382Q96SR6 550 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 HAUS8Q9BT25 410 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 DYRK1BQ9Y463 629 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ENTPD2Q9Y5L3 495 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 C2orf74A8MZ97 194 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 LDOC1O95751 146 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 UGT2B7P16662 529 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 DUSP3P51452 185 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CCNG1P51959 295 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ERVPABLB-1P60509 514 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 GNGT1P63211 74 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRDX1Q06830 199 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 PRKAA1Q13131 559 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SF1Q15637 639 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CATSPEREQ5SY80 951 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SPRED1Q7Z699 444 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SYVN1Q86TM6 617 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CUZD1Q86UP6 607 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 C17orf64Q86WR6 236 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR2L3Q8NG85 312 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 BAHD1Q8TBE0 780 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 AGAP11Q8TF27 550 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SLC5A11Q8WWX8 675 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NAT6Q93015 286 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 SLC22A18Q96BI1 424 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 NTMT1Q9BV86 223 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 MID1IP1Q9NPA3 183 aa18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CUEDC1Q9NWM3 386 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-213ENST00000540022 ARID1BQ8NFD5 2236 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OR4F21O95013 312 aa18.22■□□□□ 0.51
TNFRSF1A-213ENST00000540022 OTCP00480 354 aa18.22■□□□□ 0.51
TNFRSF1A-213ENST00000540022 CDH1P12830 882 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms