RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TRIM45Q9H8W5 580 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 NMRAL1Q9HBL8 299 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PNPLA8Q9NP80 782 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MIOSQ9NXC5 875 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACTR10Q9NZ32 417 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DCDC2Q9UHG0 476 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF222Q9UK12 451 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ELF5Q9UKW6 265 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RUVBL2Q9Y230 463 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RAP2CQ9Y3L5 183 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PNMA8CA0A1B0GUJ8 204 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TCRBV5S2A0A599 114 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TMEM191CA6NGB0 347 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RRN3P2A6NIE6 340 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 G3V2T6 193 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CBX4O00257 560 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 GNGT2O14610 69 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FAM20BO75063 409 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PSIP1O75475 530 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PRKRAO75569 313 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ECDO95905 644 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 VIPP01282 170 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 C1QBP02746 253 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 NTRK1P04629 796 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 URODP06132 367 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HEXBP07686 556 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SLC6A2P23975 617 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HRH2P25021 359 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PSMA2P25787 234 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PTBP1P26599 531 aaKnown RBP eCLIP3.63□□□□□ -1.83
MCF2-210ENST00000536274 GNA15P30679 374 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HNMTP50135 292 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ALDH3A2P51648 485 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CAV3P56539 151 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 BPIFB3P59826 476 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RPP30P78346 268 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 TLE2Q04725 743 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LIPEQ05469 1076 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF91Q05481 1191 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TRAP1Q12931 704 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 GBX1Q14549 363 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MELKQ14680 651 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LARS2Q15031 903 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PDK2Q15119 407 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SEC23BQ15437 767 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 KCNA10Q16322 511 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 NFIL3Q16649 462 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 BMT2Q1RMZ1 405 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HKDC1Q2TB90 917 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PAGE3Q5JUK9 113 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PLA2G2CQ5R387 149 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LIN9Q5TKA1 542 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FSTL4Q6MZW2 842 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 BHLHB9Q6PI77 547 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF782Q6ZMW2 699 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 SV2AQ7L0J3 742 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LRRC8DQ7L1W4 858 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF605Q86T29 641 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZDHHC13Q8IUH4 622 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SPATA2LQ8IUW3 424 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ABRAQ8N0Z2 381 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DAW1Q8N136 415 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MIER2Q8N344 545 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PACRGLQ8N7B6 248 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SLC37A3Q8NCC5 494 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 UTP15Q8TED0 518 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RNF34Q969K3 372 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ELMO2Q96JJ3 720 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF512BQ96KM6 892 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 SENP8Q96LD8 212 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RNF157Q96PX1 679 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PEBP4Q96S96 227 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 EBNA1BP2Q99848 306 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RTP3Q9BQQ7 232 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TSEN34Q9BSV6 310 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACE2Q9BYF1 805 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 BRINP2Q9C0B6 783 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.63□□□□□ -1.83
MCF2-210ENST00000536274 SHARPINQ9H0F6 387 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 C11orf49Q9H6J7 331 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RNF121Q9H920 327 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 UNKLQ9H9P5 680 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RAVER2Q9HCJ3 691 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 EXOSC4Q9NPD3 245 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PRDM9Q9NQV7 894 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FAM212BQ9NTI7 297 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CTSFQ9UBX1 484 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MIOXQ9UGB7 285 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ANAPC2Q9UJX6 822 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 BAIAP2Q9UQB8 552 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RNF6Q9Y252 685 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 IRAK3Q9Y616 596 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 A0A0J9YYE9 177 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 SH3D21A4FU49 640 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 LRRC14BA6NHZ5 514 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 H0YAE9 185 aa3.62□□□□□ -1.83
MCF2-210ENST00000536274 FXYD1O00168 92 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms