RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CRTC3Q6UUV7 619 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 RFLNAQ6ZTI6 216 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 GAREM2Q75VX8 874 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF551Q7Z340 670 aaPredicted RBP15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 DEFB128Q7Z7B8 93 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 CYP4Z1Q86W10 505 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 OR2T29Q8NH02 315 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 LMLNQ96KR4 655 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 FCRL1Q96LA6 429 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 TM9SF3Q9HD45 589 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 PLXNB3Q9ULL4 1909 aa15.57■□□□□ 0.08
CHMP1A-202ENST00000535997 A0A1W2PQ67 120 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 UGDHO60701 494 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF682O95780 498 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CTSOP43234 321 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 STK19P49842 368 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 POLR2LP62875 67 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 LIPJQ5W064 366 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ZCCHC8Q6NZY4 707 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ERICH5Q6P6B1 374 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 C16orf87Q6PH81 154 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 NEK10Q6ZWH5 1172 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF554Q86TJ5 538 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ANKRD13BQ86YJ7 626 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 VRK3Q8IV63 474 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC22A15Q8IZD6 547 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 SLAIN1Q8ND83 568 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 NELL1Q92832 810 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 PANX1Q96RD7 426 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 MBD1Q9UIS9 605 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 RPS6KA6Q9UK32 745 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 TMPRSS11EQ9UL52 423 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 BNIP3LO60238 219 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 PRAMEF4O60810 478 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 BCAS1O75363 584 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 KCNK5O95279 499 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ZBTB11O95625 1053 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 B3GALT4O96024 378 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 HALP42357 657 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CXCR4P61073 352 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CYP4F8P98187 520 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 PIGFQ07326 219 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CHIT1Q13231 466 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 RAPSNQ13702 412 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 KCNC3Q14003 757 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 KEAP1Q14145 624 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 VMACQ2NL98 169 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CARD16Q5EG05 197 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 PRAMEF9Q5VWM5 478 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 C22orf39Q6P5X5 142 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 CYP2U1Q7Z449 544 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 OR8J2Q8NGG1 315 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 OR10Q1Q8NGQ4 319 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 COX4I2Q96KJ9 171 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 DGCR6LQ9BY27 220 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 REXO4Q9GZR2 422 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 PAK1IP1Q9NWT1 392 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 ERVW-1Q9UQF0 538 aa15.56■□□□□ 0.08
CHMP1A-202ENST00000535997 FPGTO14772 594 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 SCN2BO60939 215 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 AOC2O75106 756 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 FTH1P02794 183 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ENGP17813 658 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 HTR1BP28222 390 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 DNAJA1P31689 397 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 KDELR2P33947 212 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 PFN3P60673 137 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 IL5RAQ01344 420 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 CSTF3Q12996 717 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC14A1Q13336 389 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 KDM4DQ6B0I6 523 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 DDX53Q86TM3 631 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ASZ1Q8WWH4 475 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 AUTS2Q8WXX7 1259 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 METTL2AQ96IZ6 378 aaKnown RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 BCL7BQ9BQE9 202 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 EMILIN2Q9BXX0 1053 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 VPS29Q9UBQ0 182 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ENPP5Q9UJA9 477 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 OBSL1O75147 1896 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 KIAA1671Q9BY89 1806 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ZNF99A8MXY4 864 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 NDUFS2O75306 463 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ANGPTL1O95841 491 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 HNRNPCP07910 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 C1SP09871 688 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 JUNDP17535 347 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ITPKAP23677 461 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 HLA-FP30511 346 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 EMX1Q04741 257 aaPredicted RBP15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ACOX1Q15067 660 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC44A4Q53GD3 710 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 DPY19L3Q6ZPD9 716 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 SLC16A12Q6ZSM3 486 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 SYT12Q8IV01 421 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 DUSP21Q9H596 190 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 VNN3Q9NY84 501 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 B4GALT6Q9UBX8 382 aa15.55■□□□□ 0.08
CHMP1A-202ENST00000535997 ABCG2Q9UNQ0 655 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms