RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 PRMT9Q6P2P2 845 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 DRICH1Q6PGQ1 229 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 FIGLAQ6QHK4 219 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 IGFL2Q6UWQ7 119 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 C4orf22Q6V702 233 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 NAPRTQ6XQN6 538 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 SYDE1Q6ZW31 735 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 LRRC6Q86X45 466 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 SLC34A3Q8N130 599 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 MPP5Q8N3R9 675 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 TTC29Q8NA56 475 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 ST6GALNAC3Q8NDV1 305 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 PPHLN1Q8NEY8 458 aaKnown RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 CFAP61Q8NHU2 1237 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 FOPNLQ96NB1 174 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 WDR77Q9BQA1 342 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 SELENOSQ9BQE4 189 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 TRIM51Q9BSJ1 452 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 TRIM31Q9BZY9 425 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 LHPPQ9H008 270 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 DPH5Q9H2P9 285 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 EPS8L2Q9H6S3 715 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 CUTCQ9NTM9 273 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 CATSPERZQ9NTU4 200 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 PIH1D1Q9NWS0 290 aaKnown RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 ERRFI1Q9UJM3 462 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 FBXL4Q9UKA2 621 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 RAB21Q9UL25 225 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 PLAGL1Q9UM63 463 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 FAM169AQ9Y6X4 670 aa8.05□□□□□ -1.12
RPUSD4-209ENST00000534393 PCNX1Q96RV3 2341 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 FITM1A5D6W6 292 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 PCDH17O14917 1159 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CD3EAPO15446 510 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CNOT3O75175 753 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 ERLIN1O75477 346 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 IFNB1P01574 187 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 KRT14P02533 472 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 APRTP07741 180 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 PEBP1P30086 187 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TSFMP43897 325 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 OCA2Q04671 838 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TLR1Q15399 786 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TRADDQ15628 312 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TRIP13Q15645 432 aaPredicted RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 OASLQ15646 514 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 RBBP7Q16576 425 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 PCID2Q5JVF3 399 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 HIST2H2BCQ6DN03 193 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 PTRHD1Q6GMV3 140 aaKnown RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 ISLR2Q6UXK2 745 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 OTOAQ7RTW8 1153 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CUZD1Q86UP6 607 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TAB3Q8N5C8 712 aaPredicted RBP8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CCDC89Q8N998 374 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 LMNTD1Q8N9Z9 388 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 LINC01555Q8NAE3 123 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 HMGCLL1Q8TB92 370 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 DNAJB14Q8TBM8 379 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 SLCO2A1Q92959 643 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 ZNF285Q96NJ3 590 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 LMF1Q96S06 567 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 SPSB2Q99619 263 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 MENTQ9BUN1 341 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 SLC6A20Q9NP91 592 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 FAM114A2Q9NRY5 505 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 SLC22A11Q9NSA0 550 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 PAK5Q9P286 719 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 ASIC3Q9UHC3 531 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 GNPTGQ9UJJ9 305 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 NFU1Q9UMS0 254 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CDC14AQ9UNH5 594 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 TCAF1Q9Y4C2 921 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 KLK4Q9Y5K2 254 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 HS3ST3B1Q9Y662 390 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 CPAMD8Q8IZJ3 1885 aa8.04□□□□□ -1.12
RPUSD4-209ENST00000534393 HYKKA2RU49 373 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 CCDC151A5D8V7 595 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 VSTM2BA6NLU5 285 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 H3BMM5 538 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 SOCS6O14544 535 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 PRPF4O43172 522 aaKnown RBP eCLIP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 PRICKLE3O43900 615 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 NDUFS3O75489 264 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 CTSBP07858 339 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 RNF224P0DH78 156 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 EDN3P14138 238 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 ETS1P14921 441 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 H2AFXP16104 143 aaPredicted RBP8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 FDXRP22570 491 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 GRIA3P42263 894 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 NPY2RP49146 381 aa8.03□□□□□ -1.12
RPUSD4-209ENST00000534393 VPS41P49754 854 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms