RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SNX24Q9Y343 169 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 DHRS7Q9Y394 339 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■■■□□ 18
SSBP3-215ENST00000533946 NUP210LQ5VU65 1888 aa9.21□□□□□ -0.93
SSBP3-215ENST00000533946 CNTRLQ7Z7A1 2325 aa9.21□□□□□ -0.93
SSBP3-215ENST00000533946 OR2A25A4D2G3 310 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 E7ENX8 843 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 H0YGG7 62 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 GFYI3L273 518 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 HAT1O14929 419 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 ZSCAN12O43309 604 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 RFPL1O75677 317 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 SYF2O95926 243 aaKnown RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 EIF2S1P05198 315 aaKnown RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 KLK3P07288 261 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 CELA2AP08217 269 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 RAB40ALP0C0E4 278 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 RNF224P0DH78 156 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 IMPA1P29218 277 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 PNLIPRP1P54315 467 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 ADARP55265 1226 aaKnown RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 ARF3P61204 181 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 PLOD1Q02809 727 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 TAP2Q03519 686 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 C2orf54Q08AI8 447 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 Q0VFX4 171 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 TMED2Q15363 201 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 C18orf21Q32NC0 220 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 TEDDM1Q5T9Z0 273 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 ATG14Q6ZNE5 492 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 MRGPREQ86SM8 312 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 PAQR7Q86WK9 346 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 LRRC6Q86X45 466 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 RBMXL3Q8N7X1 1067 aaKnown RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 INPP5DQ92835 1189 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 C19orf60Q96EN9 201 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 PANX3Q96QZ0 392 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 TCF12Q99081 682 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 SPSB2Q99619 263 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 EFHD1Q9BUP0 239 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 CHRNA10Q9GZZ6 450 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 ATG10Q9H0Y0 220 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 SPNS1Q9H2V7 528 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 MLXIPLQ9NP71 852 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 IFT80Q9P2H3 777 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 PDE10AQ9Y233 779 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 HEMK1Q9Y5R4 338 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 TEX264Q9Y6I9 313 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 USP9YO00507 2555 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 RP1L1Q8IWN7 2480 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-215ENST00000533946 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.94
SSBP3-215ENST00000533946 CXorf49A8MYA2 514 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 E5RI56 91 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 H7BY64 318 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 CES2O00748 559 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 SOCS6O14544 535 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 LCMT2O60294 686 aaKnown RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 JRKO75564 520 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 CEACAM4O75871 244 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 PGAM1P18669 254 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 CASRP41180 1078 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 DCDP81605 110 aaKnown RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 MAT1AQ00266 395 aaKnown RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 MC1RQ01726 317 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 MEF2AQ02078 507 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 NKG7Q16617 165 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 VWA2Q5GFL6 755 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 HIST2H2BCQ6DN03 193 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 ZNF425Q6IV72 752 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 TCTN3Q6NUS6 607 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 VN1R4Q7Z5H5 301 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 GPR135Q8IZ08 494 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 N4BP2L2Q92802 583 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 SLCO2A1Q92959 643 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 ALKBH8Q96BT7 664 aaKnown RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 PYCR2Q96C36 320 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 C8orf44Q96CB5 159 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 MOCOSQ96EN8 888 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 PRAP1Q96NZ9 151 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 SELENOSQ9BQE4 189 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 SLC7A5P2Q9GIP4 190 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 DPH5Q9H2P9 285 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 FANCEQ9HB96 536 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 CUTCQ9NTM9 273 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 INTS10Q9NVR2 710 aaKnown RBP9.2□□□□□ -0.94
SSBP3-215ENST00000533946 P4HTMQ9NXG6 502 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 TUBD1Q9UJT1 453 aa9.2□□□□□ -0.94
SSBP3-215ENST00000533946 FEZF1A0PJY2 475 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 MAGEB16A2A368 324 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 HYKKA2RU49 373 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 H3BMM5 538 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SMAPO00193 183 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 RAD51CO43502 376 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 FOXS1O43638 330 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SEC31AO94979 1220 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms