RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ADGRG5Q8IZF4 528 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 OSCP1Q8WVF1 389 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CANT1Q8WVQ1 401 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 BTN2A2Q8WVV5 523 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 LRTOMTQ8WZ04 291 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 STARD8Q92502 1023 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 TESCQ96BS2 214 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CCDC97Q96F63 343 aaPredicted RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 TEX37Q96LM6 180 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 HHIPQ96QV1 700 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CGREF1Q99674 301 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SLC39A3Q9BRY0 314 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SPATA16Q9BXB7 569 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 DPY30Q9C005 99 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SMG9Q9H0W8 520 aaKnown RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 PCDH12Q9NPG4 1184 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 DNAJC11Q9NVH1 559 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 KLQ9UEF7 1012 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 ANAPC2Q9UJX6 822 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 NAV3Q8IVL0 2385 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 AHCTF1Q8WYP5 2266 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 F5P12259 2224 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ZNF839A8K0R7 811 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 TXNDC9O14530 226 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 SGTAO43765 313 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 NFATC1O95644 943 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 CYP17A1P05093 508 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 FAM58BPP0C7Q3 252 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ADH5P11766 374 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 PSMC3P17980 439 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 EPORP19235 508 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 XPAP23025 273 aaPredicted RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 ARL1P40616 181 aaPredicted RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 PRLHRP49683 370 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 NME5P56597 212 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ST8SIA6P61647 398 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 RPL38P63173 70 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 PLOD1Q02809 727 aaPredicted RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 ELP6Q0PNE2 266 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 IMPG1Q17R60 797 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 C18orf21Q32NC0 220 aaPredicted RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 EML3Q32P44 896 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 BCL7AQ4VC05 210 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 TIGD2Q4W5G0 525 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 USP39Q53GS9 565 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 TBCELQ5QJ74 424 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 LRIF1Q5T3J3 769 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ATG9BQ674R7 924 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 FBXL19Q6PCT2 694 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 TSSK4Q6SA08 328 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 CYP2R1Q6VVX0 501 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ZBTB49Q6ZSB9 765 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 HSD11B1LQ7Z5J1 315 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 SPRED1Q7Z699 444 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 RGL4Q8IZJ4 473 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 SNX31Q8N9S9 440 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 CSGALNACT1Q8TDX6 532 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 SLC13A3Q8WWT9 602 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 VPS33AQ96AX1 596 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 CCDC138Q96M89 665 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 C1orf50Q9BV19 199 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 MRPS26Q9BYN8 205 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 ZCCHC2Q9C0B9 1178 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 LINC00597Q9H2U6 94 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 COQ10BQ9H8M1 238 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 GORASP2Q9H8Y8 452 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 ACTR8Q9H981 624 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 GPRC5BQ9NZH0 403 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 RNF11Q9Y3C5 154 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 POLR3HQ9Y535 204 aaPredicted RBP9.39□□□□□ -0.91
CHKA-207ENST00000533728 AP1M2Q9Y6Q5 423 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
CHKA-207ENST00000533728 A0A096LPI6 279 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 TRBV5-3A0A0A0MS03 114 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 EDDM13A0A1B0GTR0 161 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 SLC5A10A0PJK1 596 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 C16orf96A6NNT2 1141 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 ATXN7O15265 892 aaPredicted RBP9.38□□□□□ -0.91
CHKA-207ENST00000533728 HYAL3O43820 417 aaPredicted RBP9.38□□□□□ -0.91
CHKA-207ENST00000533728 ATG13O75143 517 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 GMNNO75496 209 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 SCELO95171 688 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 CATP04040 527 aaKnown RBP9.38□□□□□ -0.91
CHKA-207ENST00000533728 CDH1P12830 882 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 JUPP14923 745 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 CEBPBP17676 345 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 GGT1P19440 569 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 ITGB7P26010 798 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 HNF4AP41235 474 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 CASP2P42575 452 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 CCT8P50990 548 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 POLE2P56282 527 aa9.38□□□□□ -0.91
CHKA-207ENST00000533728 RPS14P62263 151 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms