RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 A0A1W2PPM1 405 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 KRTAP16-1A8MUX0 517 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.34□□□□□ -2.03
ATM-220ENST00000533526 MYBL1P10243 752 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 EPCAMP16422 314 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 UGT1A4P22310 534 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 HNF4AP41235 474 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 RAD52P43351 418 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 TSFMP43897 325 aaKnown RBP2.34□□□□□ -2.03
ATM-220ENST00000533526 VAMP7P51809 220 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 GCNT1Q02742 428 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 RALGDSQ12967 914 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 SGCGQ13326 291 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 DRP2Q13474 957 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 UGP2Q16851 508 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 TMEM266Q2M3C6 531 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 SLC25A53Q5H9E4 307 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 ERMARDQ5T6L9 678 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 CST9LP1Q5W188 147 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 KRT39Q6A163 491 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 OR4A47Q6IF82 309 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 ZBTB49Q6ZSB9 765 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 CENPVQ7Z7K6 275 aaPredicted RBP2.34□□□□□ -2.03
ATM-220ENST00000533526 MFN1Q8IWA4 741 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 LYG1Q8N1E2 194 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 NUP37Q8NFH4 326 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 OR7A2PQ8NGA2 310 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 GATAD1Q8WUU5 269 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 APOBEC4Q8WW27 367 aaKnown RBP2.34□□□□□ -2.03
ATM-220ENST00000533526 ROBO4Q8WZ75 1007 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 PIGBQ92521 554 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 FAM71F1Q96KD3 344 aaPredicted RBP2.34□□□□□ -2.03
ATM-220ENST00000533526 NSMCE3Q96MG7 304 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 LPAR4Q99677 370 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 CPNE1Q99829 537 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 VGLL1Q99990 258 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 DGCR6LQ9BY27 220 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 THAP2Q9H0W7 228 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 GSN-AS1Q9NRJ2 163 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 NKIRAS2Q9NYR9 191 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 BCCIPQ9P287 314 aaKnown RBP eCLIP2.34□□□□□ -2.03
ATM-220ENST00000533526 WDR83OSQ9Y284 106 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 PPP2R2CQ9Y2T4 447 aa2.34□□□□□ -2.03
ATM-220ENST00000533526 TRAV24A0A0B4J272 114 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ERI2A8K979 691 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 SNX3O60493 162 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 MAGEC1O60732 1142 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 RPS6KA5O75582 802 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 DDHD2O94830 711 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 MOCS3O95396 460 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ATP5BP06576 529 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 CSN3P07498 182 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ADRB2P07550 413 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 MYL6BP14649 208 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 DARSP14868 501 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 CYP2A7P20853 494 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ACHEP22303 614 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 LHCGRP22888 699 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 SP100P23497 879 aaPredicted RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 EEF1DP29692 281 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 HSD17B3P37058 310 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 CETN2P41208 172 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 GSCP56915 257 aaPredicted RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 ELAVL2Q12926 359 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 TRAP1Q12931 704 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 EFTUD2Q15029 972 aaKnown RBP eCLIP2.33□□□□□ -2.04
ATM-220ENST00000533526 NECTIN1Q15223 517 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 NPTX1Q15818 432 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ZNF74Q16587 644 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 TCP11X2Q5H9J9 407 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 NOTUMQ6P988 496 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 RBPMS2Q6ZRY4 209 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 MMD2Q8IY49 270 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 FAM89BQ8N5H3 189 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 RASGEF1AQ8N9B8 481 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 XXYLT1Q8NBI6 393 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 KCTD6Q8NC69 237 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 OR5T2Q8NGG2 359 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 SMAP2Q8WU79 429 aaPredicted RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 SECISBP2LQ93073 1101 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 ANKRD9Q96BM1 317 aaPredicted RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 C4orf45Q96LM5 186 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 NECTIN4Q96NY8 510 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 SPAG5Q96R06 1193 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 MAP3K3Q99759 626 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 EGFL8Q99944 293 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 PYGO2Q9BRQ0 406 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 CABLES2Q9BTV7 478 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 CDK19Q9BWU1 502 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 NYXQ9GZU5 481 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 UPF3AQ9H1J1 476 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 MED20Q9H944 212 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 ANKEF1Q9NU02 776 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 PAK5Q9P286 719 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 SWAP70Q9UH65 585 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 PA2G4Q9UQ80 394 aaKnown RBP2.33□□□□□ -2.04
ATM-220ENST00000533526 R4GN57 208 aa2.33□□□□□ -2.04
ATM-220ENST00000533526 IGSF1Q8N6C5 1336 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms