RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PRELID1Q9Y255 219 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 V9GYQ6 96 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 DYRK3O43781 588 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CLIC3O95833 236 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 OR56A5P0C7T3 313 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 MTHFD1P11586 935 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 MYOGP15173 224 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 SYN1P17600 705 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CEBPBP17676 345 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 XPAP23025 273 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 ETV3P41162 512 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ZFP36L2P47974 494 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 SERPINB10P48595 397 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 FPGSQ05932 587 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP35-207ENST00000530546 LRIT3Q3SXY7 679 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PRMT9Q6P2P2 845 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CYP20A1Q6UW02 462 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 MINDY1Q8N5J2 469 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 FKBP10Q96AY3 582 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CPEB1Q9BZB8 566 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 OAZ3Q9UMX2 235 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PIKFYVEQ9Y2I7 2098 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 A8MU76 341 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 STK16O75716 305 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 EPB42P16452 691 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 GGT5P36269 586 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 ADARB1P78563 741 aaKnown RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 ZNF77Q15935 545 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 IMPG1Q17R60 797 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 TCEAL5Q5H9L2 206 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 RBM48Q5RL73 367 aaKnown RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 TMEM240Q5SV17 173 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 SLC22A16Q86VW1 577 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 BPHLQ86WA6 291 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 RALGPS2Q86X27 583 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 C12orf76Q8N812 135 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 PPM1MQ96MI6 270 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 ZNF229Q9UJW7 825 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 ZNF490Q9ULM2 529 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 FAM149AA5PLN7 773 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 C16orf96A6NNT2 1141 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 ARHGEF15O94989 841 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 ANXA5P08758 320 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 CXCR2P25025 360 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 NNMTP40261 264 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 POLR2LP62875 67 aaKnown RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 LIPEQ05469 1076 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PRKG2Q13237 762 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.618e-6■■■■□ 22.7
USP35-207ENST00000530546 AQP6Q13520 282 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PTGR1Q14914 329 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PRR23CQ6ZRP0 262 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 CHST15Q7LFX5 561 aaPredicted RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 SLCO6A1Q86UG4 719 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 CLHC1Q8NHS4 586 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 ITFG1Q8TB96 612 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 TMEM125Q96AQ2 219 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 FUNDC2Q9BWH2 189 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 FAM83DQ9H4H8 585 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PCDH12Q9NPG4 1184 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 PDE10AQ9Y233 779 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 MRPS23Q9Y3D9 190 aaKnown RBP11.24□□□□□ -0.61
USP35-207ENST00000530546 IRAK3Q9Y616 596 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
USP35-207ENST00000530546 FAM234BA2RU67 622 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 EI24O14681 340 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 YAP1P46937 504 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 GSK3BP49841 420 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 BNIP2Q12982 314 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 SELPLGQ14242 412 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 SLC16A12Q6ZSM3 486 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 LSM14AQ8ND56 463 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 ZFP90Q8TF47 636 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 RASSF5Q8WWW0 418 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 LRRC3BQ96PB8 259 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 KCTD14Q9BQ13 255 aaPredicted RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 RIOK2Q9BVS4 552 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ZIM2Q9NZV7 527 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 TBC1D14Q9P2M4 693 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 PPIL1Q9Y3C6 166 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 PABPN1LA6NDY0 278 aaKnown RBP11.23□□□□□ -0.61
USP35-207ENST00000530546 INPP4BO15327 924 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 XYLBO75191 536 aa11.23□□□□□ -0.61
USP35-207ENST00000530546 ULK1O75385 1050 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms