RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 COMTP21964 271 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 FBLP22087 321 aaKnown RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 CTNNA2P26232 953 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 PSMB4P28070 264 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 RBL1P28749 1068 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 PKLRP30613 574 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 KRTAP10-9P60411 292 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ADORA2A-AS1P86434 159 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 EEF1A2Q05639 463 aaKnown RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 OLIG2Q13516 323 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 C3AR1Q16581 482 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 DBN1Q16643 649 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 MUM1Q2TAK8 710 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 KRTCAP3Q53RY4 240 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ANKRD20A2Q5SQ80 823 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ANKRD20A1Q5TYW2 823 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ANKRD20A3Q5VUR7 823 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 HIBCHQ6NVY1 386 aaPredicted RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 TTC23LQ6PF05 361 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 TAX1BP1Q86VP1 789 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 DCUN1D3Q8IWE4 304 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 RCOR2Q8IZ40 523 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 EID3Q8N140 333 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 C2orf73Q8N5S3 287 aaPredicted RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 CFAP61Q8NHU2 1237 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 POM121Q96HA1 1249 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 CDKN2AIPNLQ96HQ2 116 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ZNF285Q96NJ3 590 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 TSSK1BQ9BXA7 367 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 RAB11FIP5Q9BXF6 653 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 NLE1Q9NVX2 485 aaPredicted RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 STMN3Q9NZ72 180 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 IMPACTQ9P2X3 320 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 TRPC4Q9UBN4 977 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ZC3H7BQ9UGR2 993 aaKnown RBP8.57□□□□□ -1.04
VPS11-203ENST00000529545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS11-203ENST00000529545 HYOU1Q9Y4L1 999 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 PCNX1Q96RV3 2341 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 hCG_1818297A0A087WSY0 165 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 IGHV1-45A0A0A0MS14 117 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 MACROD2A1Z1Q3 448 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 IDSB3KWA1 339 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 FAM227AF5H4B4 570 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 C19orf84I3L1E1 186 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 TTI1O43156 1089 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 NADKO95544 446 aaPredicted RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 GYPCP04921 128 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 EIF2S1P05198 315 aaKnown RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 HEXBP07686 556 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 PRSS56P0CW18 603 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 MSNP26038 577 aaKnown RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 CSE1LP55060 971 aaKnown RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 ZNF33BQ06732 778 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 ZNF766Q5HY98 468 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 PACS1Q6VY07 963 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 NAPRTQ6XQN6 538 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 MEX3BQ6ZN04 569 aaKnown RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 ARHGEF18Q6ZSZ5 1173 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 SPPL2CQ8IUH8 684 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 CDKL3Q8IVW4 592 aaPredicted RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 PIANPQ8IYJ0 282 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 LINC01555Q8NAE3 123 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 OR2L8Q8NGY9 312 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 GSDMBQ8TAX9 411 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 ADAMTS18Q8TE60 1221 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 THAP3Q8WTV1 239 aaPredicted RBP8.56□□□□□ -1.04
VPS11-203ENST00000529545 STYXQ8WUJ0 223 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 ASZ1Q8WWH4 475 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 CABS1Q96KC9 395 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 GORASP1Q9BQQ3 440 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 MESP1Q9BRJ9 268 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 ARNT2Q9HBZ2 717 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 ENAMQ9NRM1 1142 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 C14orf105Q9NVL8 296 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 TINAGQ9UJW2 476 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 MEMO1Q9Y316 297 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 NEU2Q9Y3R4 380 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 PRSS21Q9Y6M0 314 aa8.56□□□□□ -1.04
VPS11-203ENST00000529545 CPAMD8Q8IZJ3 1885 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 MTORP42345 2549 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 IGLV3-12A0A075B6K2 115 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 A0A0J9YVX5 310 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 A0A1W2PQ72 361 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 A8MUI8 341 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 APOC4-APOC2K7ER74 178 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 RASGRF2O14827 1237 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ZNF189O75820 626 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 APOC2P02655 101 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 APOA4P06727 396 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 TPM3P06753 285 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ANXA5P08758 320 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ITGAMP11215 1152 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ABOP16442 354 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 PPARGP37231 505 aaPredicted RBP8.55□□□□□ -1.04
VPS11-203ENST00000529545 KIR3DL1P43629 444 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 ART1P52961 327 aa8.55□□□□□ -1.04
VPS11-203ENST00000529545 CSNK1G2P78368 415 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms