RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 FAM111AQ96PZ2 611 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TEFMQ96QE5 360 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SELENOSQ9BQE4 189 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PLCD4Q9BRC7 762 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SGPP1Q9BX95 441 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 OXSMQ9NWU1 459 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM216Q9P0N5 145 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SERTAD3Q9UJW9 196 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 ADAMTS6Q9UKP5 1117 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 BTBD3Q9Y2F9 522 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PCDHGA11Q9Y5H2 935 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 KLK4Q9Y5K2 254 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 VPS13AQ96RL7 3174 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 RP1P56715 2156 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 ZFHX2Q9C0A1 2572 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM114B3SHH9 223 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 AGPSO00116 658 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 UBXN8O00124 270 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TK2O00142 265 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 NTN3O00634 580 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 GDF9O60383 454 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 NPHS1O60500 1241 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SUPT7LO94864 414 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ENO1P06733 434 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 F7P08709 466 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CD63P08962 238 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 EBLN1P0CF75 366 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TYRP1P17643 537 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 POLR2CP19387 275 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 NR1D1P20393 614 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CD1CP29017 333 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 EEF1DP29692 281 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SLC6A12P48065 614 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CCNG1P51959 295 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 OR1D5P58170 312 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SIM1P81133 766 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 IRF8Q02556 426 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 DLG1Q12959 904 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 LCP2Q13094 533 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 GTF2H2Q13888 395 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 IL11RAQ14626 422 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 RSPO4Q2I0M5 234 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CACHD1Q5VU97 1274 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ATG9BQ674R7 924 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 GTF2H2CQ6P1K8 395 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 DUS1LQ6P1R4 473 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 XKR5Q6UX68 686 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TAX1BP1Q86VP1 789 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 GPR135Q8IZ08 494 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ADGRF3Q8IZF5 1079 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 LSMEM2Q8N112 164 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PLD6Q8N2A8 252 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PTGR2Q8N8N7 351 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SRFBP1Q8NEF9 429 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TRPV3Q8NET8 790 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ABHD11Q8NFV4 315 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 OR2L3Q8NG85 312 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 FAM76AQ8TAV0 307 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SLC5A11Q8WWX8 675 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ADAMTS14Q8WXS8 1223 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CCT6BQ92526 530 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PHF21BQ96EK2 531 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 LIN37Q96GY3 246 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 FAR2Q96K12 515 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TGM7Q96PF1 710 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 NTMT1Q9BV86 223 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TBC1D10AQ9BXI6 508 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PITPNM3Q9BZ71 974 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ASPSCR1Q9BZE9 553 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 FAM117AQ9C073 453 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ZNF768Q9H5H4 540 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 NT5DC2Q9H857 520 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 ACTR8Q9H981 624 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PRM3Q9NNZ6 103 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 MRGBPQ9NV56 204 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 INTS9Q9NV88 658 aaKnown RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SOHLH2Q9NX45 425 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SEMA5BQ9P283 1151 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 PDP2Q9P2J9 529 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TAC3Q9UHF0 121 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 SNX6Q9UNH7 406 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 CLCA2Q9UQC9 943 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 BTRCQ9Y297 605 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-211ENST00000528787 TSC22D4Q9Y3Q8 395 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 AP1M2Q9Y6Q5 423 aa7.65□□□□□ -1.18
SSBP3-211ENST00000528787 HEATR5BQ9P2D3 2071 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 LY6G6EA0A0G2JKS1 128 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 TRBC2A0A5B9 178 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 SYNDIG1LA6NDD5 238 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 ANKDD1BA6NHY2 528 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 A8MT66 165 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 SLCO1B7G3V0H7 640 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 TM4SF5O14894 197 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 KLF11O14901 512 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 ZSCAN9O15535 394 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-211ENST00000528787 SPAG7O75391 227 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 KCNK5O95279 499 aa7.64□□□□□ -1.19
SSBP3-211ENST00000528787 CLDN9O95484 217 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms