RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 RP1P56715 2156 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 A0A1W2PQM1 296 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GSAPA4D1B5 854 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PPP6CO00743 305 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NDUFAB1O14561 156 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 UGT2B7P16662 529 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCND1P24385 295 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CSF2RBP32927 897 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ACADVLP49748 655 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GPLD1P80108 840 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GTF2H2Q13888 395 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 KIR2DS3Q14952 304 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CHI3L2Q15782 390 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PDK4Q16654 411 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GTF2H2CQ6P1K8 395 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 METTL2BQ6P1Q9 378 aaKnown RBP11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 KLHL35Q6PF15 583 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 LCTLQ6UWM7 567 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 USP53Q70EK8 1073 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GOLGA7Q7Z5G4 137 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SNX31Q8N9S9 440 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NCSTNQ92542 709 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PPM1MQ96MI6 270 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CDC6Q99741 560 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ABCG4Q9H172 646 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PCDHB11Q9Y5F2 797 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ENTPD2Q9Y5L3 495 aa11.72□□□□□ -0.53
TRAF3IP2-211ENST00000528599 C2orf74A8MZ97 194 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EBAG9O00559 213 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TNFSF14O43557 240 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 DUX1O43812 170 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRAMEF4O60810 478 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 KCNK5O95279 499 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NEFHP12036 1026 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EPB42P16452 691 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRDX3P30048 256 aaKnown RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ARRB2P32121 409 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 LSSP48449 732 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PPM1FP49593 454 aaPredicted RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GFERP55789 205 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CLCQ05315 142 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ASPHQ12797 758 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CDC16Q13042 620 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRKAA1Q13131 559 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SQSTM1Q13501 440 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SF1Q15637 639 aaKnown RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRAMEF9Q5VWM5 478 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ICE2Q659A1 982 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ARMC6Q6NXE6 501 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FRMD7Q6ZUT3 714 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TRIM73Q86UV7 250 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OR2L3Q8NG85 312 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZNF317Q96PQ6 595 aaPredicted RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 MIPEPQ99797 713 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PCBD2Q9H0N5 130 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 LRRN3Q9H3W5 708 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EPB41L1Q9H4G0 881 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NOL11Q9H8H0 719 aaKnown RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 IPPKQ9H8X2 491 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SEMA4BQ9NPR2 832 aaPredicted RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EPHA6Q9UF33 1036 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 POMT2Q9UKY4 750 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ATXN7L1Q9ULK2 861 aaPredicted RBP11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 AKAP13Q12802 2813 aa11.71□□□□□ -0.53
TRAF3IP2-211ENST00000528599 IGKV1-8A0A0C4DH67 115 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 A0A1B0GTL3 188 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 UBFD1O14562 309 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 OR7A17O14581 309 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CAPN5O15484 640 aaPredicted RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ITM2AO43736 263 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SERPINE1P05121 402 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RPLP0P05388 317 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GP1BAP07359 652 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SEC24CP53992 1094 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PRDX1Q06830 199 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CFAP157Q5JU67 520 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KIAA1614Q5VZ46 1190 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 IRGCQ6NXR0 463 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SPESP1Q6UW49 350 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LSMEM2Q8N112 164 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 OR52B6Q8NGF0 335 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRPC4APQ8TEL6 797 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF473Q8WTR7 871 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DYDC1Q8WWB3 177 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CKAP2Q8WWK9 683 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SREK1Q8WXA9 508 aaKnown RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF75CPQ92670 426 aaPredicted RBP11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLC22A18Q96BI1 424 aa11.71□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms