RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KATNBL1Q9H079 304 aa14.27□□□□□ -0.13
CAPN1-214ENST00000528165 PLSCR3Q9NRY6 295 aa14.27□□□□□ -0.13
CAPN1-214ENST00000528165 PLCXD1Q9NUJ7 323 aa14.27□□□□□ -0.13
CAPN1-214ENST00000528165 MAN2B2Q9Y2E5 1009 aa14.27□□□□□ -0.13
CAPN1-214ENST00000528165 KIAA0513O60268 411 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SLITRK5O94991 958 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 C9P02748 559 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 HNF4AP41235 474 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 CDKN2CP42773 168 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 CYP4F2P78329 520 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 GALK2Q01415 458 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 USP39Q53GS9 565 aaKnown RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 RAP1GAP2Q684P5 730 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 FBXL22Q6P050 247 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 Q6ZPB1 254 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 MDGA1Q8NFP4 955 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 OR10T2Q8NGX3 314 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SLC39A13Q96H72 371 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 MED30Q96HR3 178 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 HSH2DQ96JZ2 352 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 TNKS2Q9H2K2 1166 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 ASIC5Q9NY37 505 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 CRNNQ9UBG3 495 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 FKBPLQ9UIM3 349 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 PLXNB2O15031 1838 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 A0A0U1RQS6 177 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 CXCL11O14625 94 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 PRAMEF11O60813 436 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SNAI1O95863 264 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 STSP08842 583 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 NUDT6P53370 316 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 RPS14P62263 151 aaKnown RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 TTLL9Q3SXZ7 439 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SBSNQ6UWP8 590 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 ZSWIM9Q86XI8 627 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 SUN5Q8TC36 379 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 RPRD1AQ96P16 312 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-214ENST00000528165 EGFL8Q99944 293 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 GABARAPL3Q9BY60 117 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 GPR83Q9NYM4 423 aa14.26□□□□□ -0.13
CAPN1-214ENST00000528165 RFXANKO14593 260 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TREHO43280 583 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 UGT2B17O75795 530 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 B3GAT3O94766 335 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 PTHP01270 115 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ITGA2P17301 1181 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 CLCN4P51793 760 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ITGA1P56199 1179 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 MLIPQ5VWP3 458 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ZNF551Q7Z340 670 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TRIM46Q7Z4K8 759 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 SERPINA11Q86U17 422 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 LPPQ93052 612 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ULK4Q96C45 1275 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 CLIP3Q96DZ5 547 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 IRF2BPLQ9H1B7 796 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 RPRD1BQ9NQG5 326 aaKnown RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 DYRK4Q9NR20 520 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TRAPPC4Q9Y296 219 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 PCDHGB2Q9Y5G2 931 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 KLK4Q9Y5K2 254 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 IGLV3-10A0A075B6K4 115 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 FZD9O00144 591 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 PLK4O00444 970 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TNFRSF10BO14763 440 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TSPAN3O60637 253 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 B3GALT4O96024 378 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 ESR1P03372 595 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 YES1P07947 543 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 LPOP22079 712 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 GDF5P43026 501 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 BRCC3P46736 316 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 SLC14A1Q13336 389 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TRAF7Q6Q0C0 670 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 RFPL4BQ6ZWI9 263 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 SCN4BQ8IWT1 228 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TRNT1Q96Q11 434 aaKnown RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 PKMYT1Q99640 499 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 TRIM39Q9HCM9 518 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 OLA1Q9NTK5 396 aaKnown RBP14.25□□□□□ -0.13
CAPN1-214ENST00000528165 DOCK4Q8N1I0 1966 aa14.25□□□□□ -0.13
CAPN1-214ENST00000528165 MEIOCA2RUB1 952 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 HMX3A6NHT5 357 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 TFECO14948 347 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-214ENST00000528165 RGS5O15539 181 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 CA12O43570 354 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 CYP7B1O75881 506 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 WDR47O94967 919 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 CRYZL1O95825 349 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 SEMG1P04279 462 aa14.24□□□□□ -0.13
CAPN1-214ENST00000528165 RPL9P32969 192 aaKnown RBP14.24□□□□□ -0.13
CAPN1-214ENST00000528165 TNFSF8P32971 234 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms