RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 RBMXL3Q8N7X1 1067 aaKnown RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 FBXO15Q8NCQ5 510 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 COG1Q8WTW3 980 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 SMPDL3AQ92484 453 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 KCNJ9Q92806 393 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 MIPEPQ99797 713 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 CCDC68Q9H2F9 335 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 CIDEBQ9UHD4 219 aa13.59□□□□□ -0.23
CAPN1-212ENST00000527887 RP1L1Q8IWN7 2480 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-212ENST00000527887 GOLGA6L10A0A0M3HER8 536 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 HYKKA2RU49 373 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 OR2A25A4D2G3 310 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 VSTM2BA6NLU5 285 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 MYO1CO00159 1063 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 DYNC1I1O14576 645 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 CTSVO60911 334 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 CNOT3O75175 753 aaKnown RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 VPS26AO75436 327 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 USP1O94782 785 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 CCNDBP1O95273 360 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 BDKRB1P46663 353 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 FNTAP49354 379 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 VPS41P49754 854 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 NKG7Q16617 165 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 MUM1Q2TAK8 710 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 CCSMST1Q4G0I0 132 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 GLE1Q53GS7 698 aaKnown RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 SLC6A19Q695T7 634 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 RNF44Q7L0R7 432 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 MMGT1Q8N4V1 131 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 GABPB2Q8TAK5 448 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 MVB12AQ96EY5 273 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 SERPINB12Q96P63 405 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 ZFYVE21Q9BQ24 234 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 SLC29A3Q9BZD2 475 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-212ENST00000527887 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 CDC14AQ9UNH5 594 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 B3GNT3Q9Y2A9 372 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 NEU2Q9Y3R4 380 aa13.58□□□□□ -0.24
CAPN1-212ENST00000527887 ZCWPW2A0A1B0GU75 182 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ARHGEF33A8MVX0 844 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 CCDC188H7C350 402 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 EIF3FO00303 357 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 PRPF4O43172 522 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 MPC1LP0DKB6 136 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 RPA3P35244 121 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 MAGEA3P43357 314 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 CLCN7P51798 805 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 VSX2P58304 361 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ABATP80404 500 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 PRDX1Q06830 199 aaKnown RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 SRSF1Q07955 248 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 SLC9A5Q14940 896 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 LONRF1Q17RB8 773 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ACSBG2Q5FVE4 666 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 FHL5Q5TD97 284 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF470Q6ECI4 717 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 FBXO42Q6P3S6 717 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ZADH2Q8N4Q0 377 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 Q8NA96 180 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 SPATA4Q8NEY3 305 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ASB11Q8WXH4 323 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF669Q96BR6 464 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 SPSB2Q99619 263 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 PLCD4Q9BRC7 762 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ZNF304Q9HCX3 659 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 MRPS30Q9NP92 439 aaKnown RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 ZC3H7BQ9UGR2 993 aaKnown RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 RUVBL2Q9Y230 463 aaKnown RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 DHRS7Q9Y394 339 aa13.57□□□□□ -0.24
CAPN1-212ENST00000527887 USP9YO00507 2555 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 USP9XQ93008 2570 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-212ENST00000527887 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 TXNDC9O14530 226 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PCDH17O14917 1159 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 ZBTB14O43829 449 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 UQCRHP07919 91 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 ERVK-10P10266 1014 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 GP1BBP13224 206 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PSMB5P28074 263 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PNLIPRP1P54315 467 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 OCA2Q04671 838 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 FASTKQ14296 549 aaKnown RBP13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 IRAK1BP1Q5VVH5 260 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 GARNL3Q5VVW2 1013 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 PRAMEF13Q5VWM6 474 aa13.56□□□□□ -0.24
CAPN1-212ENST00000527887 LRRC8EQ6NSJ5 796 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms