RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IRF8Q02556 426 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 ABRQ12979 859 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 LIPJQ5W064 366 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 ZNF773Q6PK81 442 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 DOK6Q6PKX4 331 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 SPESP1Q6UW49 350 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 MSANTD1Q6ZTZ1 278 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 PHF12Q96QT6 1004 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 TCF25Q9BQ70 676 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 CHD7Q9P2D1 2997 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 E7EQ34 232 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 TMX2-CTNND1H3BSU7 103 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 TSPAN6O43657 245 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 UGDHO60701 494 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 ATE1O95260 518 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 FTH1P02794 183 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 KIR3DL1P43629 444 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 HPCAP84074 193 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 MYBPC3Q14896 1274 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 THAP5Q7Z6K1 395 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 THOC6Q86W42 341 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PNPT1Q8TCS8 783 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 CSGALNACT1Q8TDX6 532 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 SDCCAG3Q96C92 435 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PYURFQ96I23 114 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 OR4K3Q96R72 315 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 REXO4Q9GZR2 422 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 VNN3Q9NY84 501 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PCDHGA8Q9Y5G5 932 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 GNGT2O14610 69 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 RHOP08100 348 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 IL7RP16871 459 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 POLR2EP19388 210 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 PRPS1L1P21108 318 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PRKACGP22612 351 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 DDX6P26196 483 aaKnown RBP eCLIP17.04■□□□□ 0.32
USH1C-205ENST00000527020 MAGEA2P43356 314 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PREPP48147 710 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 HTRA4P83105 476 aaPredicted RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 CSTF3Q12996 717 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 KCNC3Q14003 757 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 NEDD8Q15843 81 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 DHRS4L2Q6PKH6 230 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 GPR155Q7Z3F1 870 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 ADHFE1Q8IWW8 467 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 OR5K1Q8NHB7 308 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 BTN2A2Q8WVV5 523 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 SGCDQ92629 289 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 NELL1Q92832 810 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 CLP1Q92989 425 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 RBM4BQ9BQ04 359 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 RBM4Q9BWF3 364 aaKnown RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
USH1C-205ENST00000527020 CIDEBQ9UHD4 219 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 CDH7Q9ULB5 785 aa17.04■□□□□ 0.32
USH1C-205ENST00000527020 PCM1Q15154 2024 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 H3BMQ9 156 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 CLGNO14967 610 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 YY2O15391 372 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 RECQL5O94762 991 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 SYN1P17600 705 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 CRHBPP24387 322 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 EMP3P54852 163 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 NTHL1P78549 312 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 VAC14Q08AM6 782 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 KCNAB2Q13303 367 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 DOC2AQ14183 400 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 DUOXA1Q1HG43 343 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 CTU2Q2VPK5 515 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 POM121L1PQ3SYA9 428 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 XKR6Q5GH73 641 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 GPR107Q5VW38 600 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 TTC23Q5W5X9 447 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 LAIR2Q6ISS4 152 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 TMEM26Q6ZUK4 368 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 DPPA4Q7L190 304 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 RBM23Q86U06 439 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 RAVER1Q8IY67 606 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 C8orf59Q8N0T1 100 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 ZNF420Q8TAQ5 688 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 MAGEB10Q96LZ2 347 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 COG8Q96MW5 612 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 MTERF1Q99551 399 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 NAA50Q9GZZ1 169 aaKnown RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 ING2Q9H160 280 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 STOX2Q9P2F5 926 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 VPS29Q9UBQ0 182 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 TMEFF2Q9UIK5 374 aaPredicted RBP17.03■□□□□ 0.32
USH1C-205ENST00000527020 IRAK3Q9Y616 596 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
USH1C-205ENST00000527020 NPC1O15118 1278 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 PCSK2P16519 638 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms