RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PFKFB4Q16877 469 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 DPY19L1Q2PZI1 675 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CTU2Q2VPK5 515 aaKnown RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ALFQ53S48 1182 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 C6orf136Q5SQH8 315 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 C6orf141Q5SZD1 244 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MARC1Q5VT66 337 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 LAIR1Q6GTX8 287 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 GLYATQ6IB77 296 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MRNIPQ6NTE8 343 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 GALNT18Q6P9A2 607 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 AFTPHQ6ULP2 937 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ANKRD13BQ86YJ7 626 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CHPFQ8IZ52 775 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MFSD4AQ8N468 514 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CHCHD4Q8N4Q1 142 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 AADATQ8N5Z0 425 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ARL14EPQ8N8R7 260 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MINDY2Q8NBR6 621 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ZNF548Q8NEK5 533 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ABHD11Q8NFV4 315 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 OR13C4Q8NGS5 318 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 DNAJB14Q8TBM8 379 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 STAG3L4Q8TBR4 150 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 PROKR1Q8TCW9 393 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MAGEE2Q8TD90 523 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SLC35B4Q969S0 331 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 FUBP1Q96AE4 644 aaKnown RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 VPS33AQ96AX1 596 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 FBXL8Q96CD0 374 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 VMP1Q96GC9 406 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SPATA17Q96L03 361 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CEP295NLQ96MC4 621 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 MUS81Q96NY9 551 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ALPK1Q96QP1 1244 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SLC22A12Q96S37 553 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ZNF347Q96SE7 839 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CGREF1Q99674 301 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 OSBPL10Q9BXB5 764 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 GSX2Q9BZM3 304 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 AMBRA1Q9C0C7 1298 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SYTL2Q9HCH5 934 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 HPS4Q9NQG7 708 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 CATSPERZQ9NTU4 200 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 NLE1Q9NVX2 485 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 IL37Q9NZH6 218 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 TRPM5Q9NZQ8 1165 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 KIAA1522Q9P206 1035 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 FOXD3Q9UJU5 478 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SCML2Q9UQR0 700 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 TLR6Q9Y2C9 796 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 SH3BP1Q9Y3L3 701 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 PCDHGB1Q9Y5G3 927 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 EP300Q09472 2414 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-223ENST00000524033 ZFHX4Q86UP3 3567 aa7.63□□□□□ -1.19
SPIDR-223ENST00000524033 TRBV5-3A0A0A0MS03 114 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 FAM92AA1XBS5 289 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 C2orf78A6NCI8 922 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 NPEPPSL1A6NEC2 478 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 SYCE1LA8MT33 242 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 E9PQ18 207 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 EIF1AYO14602 144 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 PRAMEF11O60813 436 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 TNFRSF21O75509 655 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 CNTN5O94779 1100 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 NDST3O95803 873 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 MLYCDO95822 493 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 ITGAMP11215 1152 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 IL7RP16871 459 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 HOXB9P17482 250 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 IL1RNP18510 177 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 DRD1P21728 446 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 CDH3P22223 829 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 JAK1P23458 1154 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 MAP4P27816 1152 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 HTR1BP28222 390 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 PRDX3P30048 256 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 GJA4P35212 333 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 OPRL1P41146 370 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 PPP3CCP48454 512 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 PXNP49023 591 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 HTR6P50406 440 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 GP2P55259 537 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 CD47Q08722 323 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 TRAF2Q12933 501 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 SRSF5Q13243 272 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 SERINC3Q13530 473 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 ZNF846Q147U1 533 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 SPCS2Q15005 226 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 ACOX1Q15067 660 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 RPS6KA2Q15349 733 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 TSNQ15631 228 aaKnown RBP7.62□□□□□ -1.19
SPIDR-223ENST00000524033 BCL2A1Q16548 175 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 CTF1Q16619 201 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 RGS21Q2M5E4 152 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 SMU1Q2TAY7 513 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 C5orf22Q49AR2 442 aa7.62□□□□□ -1.19
SPIDR-223ENST00000524033 TIGD2Q4W5G0 525 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms