RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 H0Y626 953 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 BLOC1S5-TXNDC5H3BN57 136 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 KLF11O14901 512 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 DFFBO76075 338 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 SIX3O95343 332 aaPredicted RBP3.56□□□□□ -1.84
SKP1-212ENST00000523966 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 C9P02748 559 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 HMBSP08397 361 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 FAM58BPP0C7Q3 252 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 PRKAR1AP10644 381 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 ADRA2CP18825 462 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 ATP5DP30049 168 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 CHRNB4P30926 498 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 MFAP3P55082 362 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GSDMDP57764 484 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 SULT2A1Q06520 285 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 TRAP1Q12931 704 aaKnown RBP3.56□□□□□ -1.84
SKP1-212ENST00000523966 TNK1Q13470 666 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 TUBB2AQ13885 445 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 PTGISQ16647 500 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 CDO1Q16878 200 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GTDC1Q4AE62 458 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 LACTB2Q53H82 288 aaPredicted RBP3.56□□□□□ -1.84
SKP1-212ENST00000523966 NHSL2Q5HYW2 709 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 SPDYCQ5MJ68 293 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 MPP7Q5T2T1 576 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 MFSD6Q6ZSS7 791 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 CCDC91Q7Z6B0 441 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GLRX5Q86SX6 157 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 BMPERQ8N8U9 685 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GDAP1Q8TB36 358 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GRK7Q8WTQ7 553 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 UBLCP1Q8WVY7 318 aaPredicted RBP3.56□□□□□ -1.84
SKP1-212ENST00000523966 FCAMRQ8WWV6 532 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 METTL21AQ8WXB1 218 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 RAD54LQ92698 747 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 SPATA33Q96N06 139 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 INTS14Q96SY0 518 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 TUBB2BQ9BVA1 445 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 TLE6Q9H808 572 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 OR6C2Q9NZP2 312 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 ZNF624Q9P2J8 865 aaPredicted RBP3.56□□□□□ -1.84
SKP1-212ENST00000523966 ITGA11Q9UKX5 1188 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 CACNA1IQ9P0X4 2223 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 CASTOR2A6NHX0 329 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 FAM86B1E9PN63 330 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 ZNF197O14709 1029 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 ATP6AP2O75787 350 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 APOHP02749 345 aaPredicted RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 ZFYP08048 801 aaPredicted RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 FAM86B2P0C5J1 330 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 IGHV4-31P0DP07 118 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 LHCGRP22888 699 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 ALDH4A1P30038 563 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 SFTPDP35247 375 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 CDKN1AP38936 164 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 LINC01547P58512 204 aaPredicted RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 MYL7Q01449 175 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 CACNG1Q06432 222 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 SQLEQ14534 574 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 CTU2Q2VPK5 515 aaKnown RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 PDLIM3Q53GG5 364 aaPredicted RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 SLC16A9Q7RTY1 509 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 SMIM29Q86T20 159 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 HOOK3Q86VS8 718 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 IQCA1Q86XH1 822 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 MARVELD2Q8N4S9 558 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 CTCFLQ8NI51 663 aaPredicted RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 AFAP1L1Q8TED9 768 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 ARHGAP45Q92619 1136 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 DNASE1L2Q92874 299 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 PYCR2Q96C36 320 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 OR2B2Q9GZK3 357 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 SDCBP2Q9H190 292 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 MINDY3Q9H8M7 445 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 Q9H8V8 135 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 SIX2Q9NPC8 291 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 PDRG1Q9NUG6 133 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 INTS9Q9NV88 658 aaKnown RBP3.55□□□□□ -1.84
SKP1-212ENST00000523966 GMEB2Q9UKD1 530 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 MAN1B1Q9UKM7 699 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 KCNK7Q9Y2U2 307 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 R4GN57 208 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 KAT6BQ8WYB5 2073 aa3.55□□□□□ -1.84
SKP1-212ENST00000523966 IL16Q14005 1332 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 A0A1W2PPK0 400 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 OOEPA6NGQ2 149 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 CCER2I3L3R5 266 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 O00370 1275 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 PSMD14O00487 310 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 PPIP5K2O43314 1243 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 EXTL3O43909 919 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 CRCPO75575 148 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 TRMUO75648 421 aaKnown RBP3.54□□□□□ -1.84
SKP1-212ENST00000523966 EML2O95834 649 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 CLPTM1O96005 669 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 NGFP01138 241 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 FRMD6-AS1P0C7T7 363 aa3.54□□□□□ -1.84
SKP1-212ENST00000523966 DARSP14868 501 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms