RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 HEATR5BQ9P2D3 2071 aa21.66■■□□□ 1.06
PVT1-218ENST00000523328 CCL21O00585 134 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 PSMD3O43242 534 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 F10P00742 488 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 SERPINA7P05543 415 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 APOA4P06727 396 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 CELA2AP08217 269 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 SNRPB2P08579 225 aaKnown RBP21.65■■□□□ 1.06
PVT1-218ENST00000523328 ACVR1Q04771 509 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 SRSF11Q05519 484 aaKnown RBP21.65■■□□□ 1.06
PVT1-218ENST00000523328 LINC00523Q86TU6 105 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 TAB3Q8N5C8 712 aaPredicted RBP21.65■■□□□ 1.06
PVT1-218ENST00000523328 OR2L3Q8NG85 312 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 OR4L1Q8NH43 312 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 ZNF778Q96MU6 729 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 MIPEPQ99797 713 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 TSSK1BQ9BXA7 367 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 RIMKLBQ9ULI2 386 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 MRPS2Q9Y399 296 aaKnown RBP21.65■■□□□ 1.06
PVT1-218ENST00000523328 MED13LQ71F56 2210 aa21.65■■□□□ 1.06
PVT1-218ENST00000523328 CACNA1CQ13936 2221 aa21.64■■□□□ 1.06
PVT1-218ENST00000523328 IGHV1-45A0A0A0MS14 117 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 KRT87PA6NCN2 255 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 RCCD1A6NED2 376 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 IDSB3KWA1 339 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 BMP10O95393 424 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 FBLP22087 321 aaKnown RBP21.64■■□□□ 1.05
PVT1-218ENST00000523328 EEF1A2Q05639 463 aaKnown RBP21.64■■□□□ 1.05
PVT1-218ENST00000523328 MUM1Q2TAK8 710 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 CCSMST1Q4G0I0 132 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 TSTD2Q5T7W7 516 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 CNSTQ6PJW8 725 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 KRT222Q8N1A0 295 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 TC2NQ8N9U0 490 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 OR2A1Q8NGT9 310 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 HMGCLL1Q8TB92 370 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 RAD51AP1Q96B01 352 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 TRIM8Q9BZR9 551 aa21.64■■□□□ 1.05
PVT1-218ENST00000523328 A0A1W2PPV9 198 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 WDPCPO95876 746 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 EIF2S1P05198 315 aaKnown RBP21.63■■□□□ 1.05
PVT1-218ENST00000523328 CETN2P41208 172 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 EMP2P54851 167 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 CDH17Q12864 832 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 PRTGQ2VWP7 1150 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 MTFR2Q6P444 385 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 RPTNQ6XPR3 784 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 RIPOR1Q6ZS17 1223 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 AMER2Q8N7J2 671 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 DNAJB8Q8NHS0 232 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 TMEM121Q9BTD3 319 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 RNF32Q9H0A6 362 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.63■■□□□ 1.05
PVT1-218ENST00000523328 SEC14L3Q9UDX4 400 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 NFS1Q9Y697 457 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 SCN2AQ99250 2005 aa21.63■■□□□ 1.05
PVT1-218ENST00000523328 OR2A25A4D2G3 310 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 FFAR3O14843 346 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 GPR42O15529 346 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 RASAL1O95294 804 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 C1orf105O95561 183 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 CRYABP02511 175 aaKnown RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 COX6B1P14854 86 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 CXCR2P25025 360 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 BDKRB1P46663 353 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 YBX1P67809 324 aaKnown RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 SPA17Q15506 151 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.62■■□□□ 1.05
PVT1-218ENST00000523328 FBXO42Q6P3S6 717 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 TTC23LQ6PF05 361 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 LDB1Q86U70 411 aaPredicted RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 CCDC170Q8IYT3 715 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 DNAAF3Q8N9W5 541 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 OR6P1Q8NGX9 317 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 SLC35B2Q8TB61 432 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 ZFYVE21Q9BQ24 234 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 RIC8BQ9NVN3 520 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 TTC7AQ9ULT0 858 aaPredicted RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 R3HDM2Q9Y2K5 976 aaKnown RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 DUSP10Q9Y6W6 482 aa21.62■■□□□ 1.05
PVT1-218ENST00000523328 SETD2Q9BYW2 2564 aaPredicted RBP21.62■■□□□ 1.05
PVT1-218ENST00000523328 KRT38O76015 456 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 WFS1O76024 890 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 WISP2O76076 250 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 ITGAMP11215 1152 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 EMP3P54852 163 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 KLF1Q13351 362 aaPredicted RBP21.61■■□□□ 1.05
PVT1-218ENST00000523328 DSG2Q14126 1118 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 TMED2Q15363 201 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 FASTKD1Q53R41 847 aaKnown RBP21.61■■□□□ 1.05
PVT1-218ENST00000523328 FAAH2Q6GMR7 532 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 HIBCHQ6NVY1 386 aaPredicted RBP21.61■■□□□ 1.05
PVT1-218ENST00000523328 ZNF295-AS1Q8N0V1 137 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 AMER3Q8N944 861 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 SYNPO2LQ9H987 977 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 TRPC4Q9UBN4 977 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 SH3BGRL2Q9UJC5 107 aa21.61■■□□□ 1.05
PVT1-218ENST00000523328 RUVBL2Q9Y230 463 aaKnown RBP21.61■■□□□ 1.05
PVT1-218ENST00000523328 LOC102723996A0A087X1L8 192 aa21.6■■□□□ 1.05
PVT1-218ENST00000523328 GOLGA6L9A6NEM1 432 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms