RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 AKR7LQ8NHP1 331 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 FAM172AQ8WUF8 416 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TSEN15Q8WW01 171 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MAFIPQ8WZ33 124 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 STMN2Q93045 179 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MUL1Q969V5 352 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF764Q96H86 408 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KCNK16Q96T55 309 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 GAD1Q99259 594 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZBTB18Q99592 522 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TRAF4Q9BUZ4 470 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 NUP62CLQ9H1M0 184 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 C11orf16Q9NQ32 467 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 CENPMQ9NSP4 180 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 DECR2Q9NUI1 292 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SMPD3Q9NY59 655 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 GLTPQ9NZD2 209 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 NKX1-2Q9UD57 310 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MUTYHQ9UIF7 546 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 DNMT3LQ9UJW3 386 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MGAT4AQ9UM21 535 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SORCS3Q9UPU3 1222 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PPP2R2CQ9Y2T4 447 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 HRH3Q9Y5N1 445 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZDBF2Q9HCK1 2354 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PLXNA3P51805 1871 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KMT2EQ8IZD2 1858 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 A0A1W2PPQ1 181 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 C12orf71A8MTZ7 269 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 H7C1Q1 480 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 K7ERI5 159 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ERVH48-1M5A8F1 160 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GTPBP1O00178 669 aaKnown RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ITM2AO43736 263 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GADD45BO75293 160 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 NDUFS2O75306 463 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF821O75541 412 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 LDLRP01130 860 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 THP07101 528 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PROS1P07225 676 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 CTXN2P0C2S0 81 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 USP17L7P0C7H9 530 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 CD36P16671 472 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 TGM1P22735 817 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 NR2F2P24468 414 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ADRA1DP25100 572 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PTAFRP25105 342 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 THBS2P35442 1172 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 FDFT1P37268 417 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 MAGEA6P43360 314 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GPR4P46093 362 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GNPDA1P46926 289 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PRIM2P49643 509 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 BMXP51813 675 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 AGFG1P52594 562 aaKnown RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PPP5CP53041 499 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 YPEL5P62699 121 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZXDAP98168 799 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 REEP5Q00765 189 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 DEFA6Q01524 100 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 DSG1Q02413 1049 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 MGAT5Q09328 741 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF252P-AS1Q0IIN9 211 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 STX4Q12846 297 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 DLG1Q12959 904 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 MAB21L1Q13394 359 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 MED21Q13503 144 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 CBFBQ13951 182 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PIGHQ14442 188 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 CNN3Q15417 329 aaKnown RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 SLC5A12Q1EHB4 618 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 TYSND1Q2T9J0 566 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PCGF3Q3KNV8 242 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM35AQ53FP2 167 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 TCP11X2Q5H9J9 407 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GLRA4Q5JXX5 417 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ATXN7L2Q5T6C5 722 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ERMARDQ5T6L9 678 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZBTB37Q5TC79 503 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GPR107Q5VW38 600 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 LIPJQ5W064 366 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 SYDE1Q6ZW31 735 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 PAGE2Q7Z2X7 111 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 GPR149Q86SP6 731 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM173Q86WV6 379 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF280BQ86YH2 543 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 BANPQ8N9N5 519 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 CHST14Q8NCH0 376 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF248Q8NDW4 579 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 MCUQ8NE86 351 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 OR52N2Q8NGI0 321 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 OR4C15Q8NGM1 316 aa7.33□□□□□ -1.24
HDAC3-216ENST00000523088 ZFP28Q8NHY6 868 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms