RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PLCL1Q15111 1095 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 LPAL2Q16609 132 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 C14orf28Q4W4Y0 310 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 KANK2Q63ZY3 851 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 LETMD1Q6P1Q0 360 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 RNF165Q6ZSG1 346 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 TMEM26Q6ZUK4 368 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 AMIGO1Q86WK6 493 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 ARL10Q8N8L6 244 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 L3MBTL4Q8NA19 623 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 BCAS4Q8TDM0 211 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 SAP25Q8TEE9 199 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF473Q8WTR7 871 aaKnown RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 ATP6V1E2Q96A05 226 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 EHD1Q9H4M9 534 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 GAREM1Q9H706 876 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 TNFRSF12AQ9NP84 129 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 NPHS2Q9NP85 383 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 PNPOQ9NVS9 261 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF225Q9UK10 706 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 TRAF6Q9Y4K3 522 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 USH1CQ9Y6N9 552 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 PI4KAP42356 2102 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 PPP6CO00743 305 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 PRICKLE3O43900 615 aaPredicted RBP12.61□□□□□ -0.39
CPNE3-205ENST00000522240 OR4F21O95013 312 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 FKBP9O95302 570 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 CLDN9O95484 217 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 CHEK2O96017 543 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 PRDX3P30048 256 aaKnown RBP12.61□□□□□ -0.39
CPNE3-205ENST00000522240 CASP2P42575 452 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 INHBCP55103 352 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 TBCCQ15814 346 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 GKAP1Q5VSY0 366 aaPredicted RBP12.61□□□□□ -0.39
CPNE3-205ENST00000522240 LIPJQ5W064 366 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 GRHL2Q6ISB3 625 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SUSD1Q6UWL2 747 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 MILR1Q7Z6M3 343 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 PIGWQ7Z7B1 504 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 C17orf64Q86WR6 236 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SLC25A45Q8N413 288 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ARL14Q8N4G2 192 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 KYQ8NBH2 561 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 C10orf82Q8WW14 230 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SLC5A11Q8WWX8 675 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SLC22A18Q96BI1 424 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 WDR34Q96EX3 536 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ELAC2Q9BQ52 826 aaKnown RBP12.61□□□□□ -0.39
CPNE3-205ENST00000522240 EFCAB11Q9BUY7 163 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SHCBP1LQ9BZQ2 653 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 XKR8Q9H6D3 395 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 KCNK4Q9NYG8 393 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 PCDHB11Q9Y5F2 797 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 ENTPD2Q9Y5L3 495 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 DNAH14Q0VDD8 3507 aa12.61□□□□□ -0.39
CPNE3-205ENST00000522240 TRBV23OR9-2A0A075B6M9 112 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 KCNE1BA0A087WTH5 132 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 A0A1B0GTL3 188 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TMEM233B4DJY2 109 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 E7EQ34 232 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 KHNYNO15037 678 aaKnown RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 CRCPO75575 148 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 RETP07949 1114 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 CHRM5P08912 532 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 KITP10721 976 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 HGFP14210 728 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 JUPP14923 745 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 NPPBP16860 134 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ENGP17813 658 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 PEBP1P30086 187 aaKnown RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 HMOX2P30519 316 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ARL1P40616 181 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 HNF4AP41235 474 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 EPHA4P54764 986 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ABATP80404 500 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 IRF8Q02556 426 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ZNF33BQ06732 778 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 CHIT1Q13231 466 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TSTA3Q13630 321 aaPredicted RBP12.6□□□□□ -0.39
CPNE3-205ENST00000522240 NR1D2Q14995 579 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 TERF2Q15554 542 aa12.6□□□□□ -0.39
CPNE3-205ENST00000522240 ATG9BQ674R7 924 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms