RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 G3BP2Q9UN86 482 aaKnown RBP12□□□□□ -0.49
TRAPPC9-206ENST00000519482 PADI2Q9Y2J8 665 aa12□□□□□ -0.49
TRAPPC9-206ENST00000519482 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-206ENST00000519482 PRRC2CQ9Y520 2896 aaKnown RBP12□□□□□ -0.49
TRAPPC9-206ENST00000519482 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 MAGEB16A2A368 324 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 SDR42E2A6NKP2 422 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 SMIM23A6NLE4 172 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ISM1B1AKI9 464 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 GOLGA8MH3BSY2 632 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 NDUFAB1O14561 156 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 GPC4O75487 556 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 FAM155BO75949 473 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 APRTP07741 180 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 CCR7P32248 378 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ELK3P41970 407 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 TTPAP49638 278 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 RAB28P51157 221 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 MLLT10P55197 1068 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 GPX6P59796 221 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 HSPA14Q0VDF9 509 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 SEMA3AQ14563 771 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZIC1Q15915 447 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 PCID2Q5JVF3 399 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ARMC3Q5W041 872 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 TLDC1Q6P9B6 456 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 LRRC8BQ6P9F7 803 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 UNC5DQ6UXZ4 953 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 RAB43Q86YS6 212 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZBTB2Q8N680 514 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 PROKR1Q8TCW9 393 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 SLC22A18Q96BI1 424 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 CATSPERZQ9NTU4 200 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 NKIRAS1Q9NYS0 192 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 SRPK3Q9UPE1 567 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 PLCL2Q9UPR0 1127 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 CDYLQ9Y232 598 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZNF451Q9Y4E5 1061 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 IKBKGQ9Y6K9 419 aa11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 USP9XQ93008 2570 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC9-206ENST00000519482 PCM1Q15154 2024 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 IQANK1A0A1B0GTG1 560 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PRMT5O14744 637 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CD3EAPO15446 510 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 KLF7O75840 302 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 APOA4P06727 396 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CBSLP0DN79 551 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CHN1P15882 459 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PEBP1P30086 187 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PKLRP30613 574 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CBSP35520 551 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 MAGEA3P43357 314 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 NPY2RP49146 381 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CSE1LP55060 971 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 HNRNPH2P55795 449 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 DCDP81605 110 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 SSPNQ14714 243 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 TMED2Q15363 201 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CAND1Q86VP6 1230 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 DCUN1D3Q8IWE4 304 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 MPP5Q8N3R9 675 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 DNAJC22Q8N4W6 341 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 FBF1Q8TES7 1133 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 COL26A1Q96A83 441 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 GBP5Q96PP8 586 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PANX3Q96QZ0 392 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 EBNA1BP2Q99848 306 aaKnown RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 SELENOSQ9BQE4 189 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 MENTQ9BUN1 341 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 IL22Q9GZX6 179 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 SPRTNQ9H040 489 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 KCNK9Q9NPC2 374 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 CHRAC1Q9NRG0 131 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 TXLNGQ9NUQ3 528 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 GPN3Q9UHW5 284 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PLAGL1Q9UM63 463 aa11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 USP9YO00507 2555 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-206ENST00000519482 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 COL12A1Q99715 3063 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 SHANK1Q9Y566 2161 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 ERICH4A6NGS2 130 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 TTLL8A6PVC2 850 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 POC1B-GALNT4F8VUJ3 575 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 KPNA5O15131 536 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZSCAN9O15535 394 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 HCRTR1O43613 425 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 DPM1O60762 260 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 SLCO2B1O94956 709 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 S1PR4O95977 384 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 IGHEP01854 428 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 CD9P21926 228 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 AOAHP28039 575 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 SSTR1P30872 391 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 GRB7Q14451 532 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 FASTKD3Q14CZ7 662 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms