RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZNF197O14709 1029 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 AP5Z1O43299 807 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ACSL3O95573 720 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 IGLV1-44P01699 117 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 CEBPBP17676 345 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 MAP2K2P36507 400 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 HSD17B3P37058 310 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 VAMP7P51809 220 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 PMP22Q01453 160 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 CAMK2DQ13557 499 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TUBB2AQ13885 445 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 PSMD6Q15008 389 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 HSP90AB3PQ58FF7 597 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TCTE1Q5JU00 501 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 SPECC1Q5M775 1068 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 C6orf136Q5SQH8 315 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ARHGEF16Q5VV41 709 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 G2E3Q7L622 706 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ADCK2Q7Z695 626 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 NBPF5PQ86XG9 351 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-207ENST00000518569 MMD2Q8IY49 270 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 KIRREL3Q8IZU9 778 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 LGI2Q8N0V4 545 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF843Q8N446 348 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ARL6IP6Q8N6S5 226 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 NIPA2Q8N8Q9 360 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 RASGEF1AQ8N9B8 481 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 OR13C3Q8NGS6 347 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 OR2T11Q8NH01 316 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 MRGPRDQ8TDS7 321 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 AFAP1L1Q8TED9 768 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 PIGBQ92521 554 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 SUSD6Q92537 303 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ATP6V1E2Q96A05 226 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 FAM71F1Q96KD3 344 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-207ENST00000518569 FER1L6-AS2Q96M78 137 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ZNF558Q96NG5 402 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TUBB2BQ9BVA1 445 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 EDEM3Q9BZQ6 932 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 ZMYND12Q9H0C1 365 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 FZD8Q9H461 694 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TLE6Q9H808 572 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 CHST11Q9NPF2 352 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 GSN-AS1Q9NRJ2 163 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 INTS10Q9NVR2 710 aaKnown RBP3.28□□□□□ -1.88
VPS13B-207ENST00000518569 TXNDC16Q9P2K2 825 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 SMARCA2P51531 1590 aa3.28□□□□□ -1.88
VPS13B-207ENST00000518569 BAZ1AQ9NRL2 1556 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-207ENST00000518569 A0A087WW49 117 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 GTPBP10A4D1E9 387 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 NR5A2O00482 541 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 DIAPH2O60879 1101 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 ATP6AP2O75787 350 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 CDK2AP2O75956 126 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 KRT33AO76009 404 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 VTNP04004 478 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 RAF1P04049 648 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 HMBSP08397 361 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 RNF224P0DH78 156 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 FDPSP14324 419 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 CASQ1P31415 396 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 RPL21P46778 160 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 TFCP2Q12800 502 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 TRIM29Q14134 588 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 HERC3Q15034 1050 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 RRS1Q15050 365 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 UGP2Q16851 508 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 FAM174BQ3ZCQ3 159 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 CCDC184Q52MB2 194 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 HSP90B2PQ58FF3 399 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 XKR3Q5GH77 459 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 FFAR4Q5NUL3 377 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 C1QTNF12Q5T7M4 302 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 OR4A47Q6IF82 309 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 C11orf57Q6ZUT1 292 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 ABI3BPQ7Z7G0 1075 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 CCAR2Q8N163 923 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 IQUBQ8NA54 791 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 NOA1Q8NC60 698 aaKnown RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 OR4C3Q8NH37 302 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 VANGL1Q8TAA9 524 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 C9orf43Q8TAL5 461 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 PROX1Q92786 737 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 GMPPAQ96IJ6 420 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 SPAG5Q96R06 1193 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 PRRG4Q9BZD6 226 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 SHARPINQ9H0F6 387 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 FAM49AQ9H0Q0 323 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-207ENST00000518569 FN3KQ9H479 309 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 DNAJC4Q9NNZ3 241 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 OR6C2Q9NZP2 312 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 POLLQ9UGP5 575 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 TMCC3Q9ULS5 477 aa3.27□□□□□ -1.89
VPS13B-207ENST00000518569 RIMBP3CA6NJZ7 1639 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 RIMBP3BA6NNM3 1639 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 RIMBP3Q9UFD9 1639 aa3.26□□□□□ -1.89
VPS13B-207ENST00000518569 MEIOCA2RUB1 952 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms