RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 IRGCQ6NXR0 463 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PRSS42Q7Z5A4 293 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PAQR7Q86WK9 346 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 TCAIMQ8N3R3 496 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 OR2L3Q8NG85 312 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 OR4D9Q8NGE8 314 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 MDM1Q8TC05 714 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 RDH11Q8TC12 318 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ZNF483Q8TF39 744 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 ATL1Q8WXF7 558 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 KLHL6Q8WZ60 621 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 NEIL2Q969S2 332 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 L3HYPDHQ96EM0 354 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 MED8Q96G25 268 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PRR11Q96HE9 360 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 AHCYL2Q96HN2 611 aaKnown RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 CCDC74BQ96LY2 380 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 TSNARE1Q96NA8 513 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 TRAPPC9Q96Q05 1148 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GFM1Q96RP9 751 aaKnown RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 MIPEPQ99797 713 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ACAT2Q9BWD1 397 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GATA5Q9BWX5 397 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 KLHL25Q9H0H3 589 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 FAM60AQ9NP50 221 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 MLXIPLQ9NP71 852 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 CCDC177Q9NQR7 707 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 OXSMQ9NWU1 459 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 WWOXQ9NZC7 414 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ZNF225Q9UK10 706 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PCTPQ9UKL6 214 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ENTPD2Q9Y5L3 495 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 TLCD2A6NGC4 264 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SLC9B1P1A6NJY1 282 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 A8MU76 341 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 E7EQ34 232 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 K7EPI3 171 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 OR7A17O14581 309 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 TM9SF1O15321 606 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 KDM1AO60341 852 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 CTSVO60911 334 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SMIM24O75264 130 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 STK16O75716 305 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 IPO13O94829 963 aaKnown RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 MT-CO3P00414 261 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 BPGMP07738 259 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 CTSBP07858 339 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 MYL2P10916 166 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SPTBP11277 2137 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 FGF3P11487 239 aaPredicted RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 IMPDH1P20839 514 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 MAGP20916 626 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SERPINB4P48594 390 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 DNAJB13P59910 316 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SPIDRQ14159 915 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SNAP47Q5SQN1 464 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 CATSPEREQ5SY80 951 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 HES3Q5TGS1 186 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 CAPN13Q6MZZ7 669 aaPredicted RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 LRRC70Q7Z2Q7 622 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 GOLGA7Q7Z5G4 137 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 RAB44Q7Z6P3 723 aaPredicted RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 PLXDC1Q8IUK5 500 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 RCBTB1Q8NDN9 531 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 OR4K1Q8NGD4 311 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 ADAMTS14Q8WXS8 1223 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 PKNOX2Q96KN3 472 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 CD180Q99467 661 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 STMN4Q9H169 189 aaPredicted RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 GSTO2Q9H4Y5 243 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SYNDIG1Q9H7V2 258 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 TNFRSF12AQ9NP84 129 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 KCNK9Q9NPC2 374 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 C1GALT1Q9NS00 363 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 ABCF3Q9NUQ8 709 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 DNAJC11Q9NVH1 559 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 SIDT1Q9NXL6 827 aaKnown RBP9.51□□□□□ -0.89
CLN8-202ENST00000517514 KLHL3Q9UH77 587 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 TMCO1Q9UM00 188 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 WASF3Q9UPY6 502 aa9.51□□□□□ -0.89
CLN8-202ENST00000517514 KCNE1BA0A087WTH5 132 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 A0A0J9YY10 115 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 OR2A25A4D2G3 310 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 ZNF839A8K0R7 811 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 H3BMH7 237 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 H7BY64 318 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 MATN2O00339 956 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 UBFD1O14562 309 aaKnown RBP9.5□□□□□ -0.89
CLN8-202ENST00000517514 HYAL3O43820 417 aaPredicted RBP9.5□□□□□ -0.89
CLN8-202ENST00000517514 CCNT2O60583 730 aaKnown RBP9.5□□□□□ -0.89
CLN8-202ENST00000517514 ZWINTO95229 277 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
CLN8-202ENST00000517514 ANKRD34CP0C6C1 535 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 CDH1P12830 882 aa9.5□□□□□ -0.89
CLN8-202ENST00000517514 TSPAN8P19075 237 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms