RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 GSK3BP49841 420 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 EEFSECP57772 596 aaKnown RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 LIPEQ05469 1076 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 TSTA3Q13630 321 aaPredicted RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 DDX39BQ13838 428 aaKnown RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 TRIP10Q15642 601 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 COL13A1Q5TAT6 717 aaPredicted RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 NOXRED1Q6NXP6 359 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 IZUMO2Q6UXV1 221 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 FAM9CQ8IZT9 166 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 TFGQ92734 400 aaPredicted RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 ZUFSPQ96AP4 578 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 WDR34Q96EX3 536 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 PPM1MQ96MI6 270 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 ECSITQ9BQ95 431 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 TTYH1Q9H313 450 aaPredicted RBP14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 ALG2Q9H553 416 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 VPS29Q9UBQ0 182 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 DYRK1BQ9Y463 629 aa14.94□□□□□ -0.02
THUMPD3-210ENST00000515662 STAMBPO95630 424 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 FUCA1P04066 466 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 HSD3B1P14060 373 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 PCSK2P16519 638 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 KELP23276 732 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 HSD3B2P26439 372 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 MRPS21P82921 87 aaKnown RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 LRRC36Q1X8D7 754 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TMPRSS11BQ86T26 416 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 HORMAD1Q86X24 394 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 DCUN1D3Q8IWE4 304 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 LILRA2Q8N149 483 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 SLC44A3Q8N4M1 653 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 OR7G3Q8NG95 312 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 GTF2H4Q92759 462 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 RAD51AP1Q96B01 352 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 LRGUKQ96M69 825 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TSSK3Q96PN8 268 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 UHRF1Q96T88 793 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 CGREF1Q99674 301 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 VCX3BQ9H321 246 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 COPS7BQ9H9Q2 264 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 BRF2Q9HAW0 419 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 KCNK12Q9HB15 430 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 PREBQ9HCU5 417 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 EGFL7Q9UHF1 273 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 RIMS3Q9UJD0 308 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 SCML1Q9UN30 329 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 LRCH1Q9Y2L9 728 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 NEUROG3Q9Y4Z2 214 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 ATG2BQ96BY7 2078 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3DA0A087WVF3 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3IA0A087WXS9 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3EA0A087X179 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3KA0A087X1G2 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 KLHL33A6NCF5 533 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3FA6NER0 549 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3LB9A6J9 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3HP0C7X1 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 UBTFL6P0CB48 400 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 POU3F3P20264 500 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 IGFBP4P22692 258 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 IGFALSP35858 605 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 MRPS35P82673 323 aaKnown RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 CATSPEREQ5SY80 951 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 IER5LQ5T953 404 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 ATG9BQ674R7 924 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3GQ6DHY5 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3CQ6IPX1 549 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 TBC1D3Q8IZP1 549 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 OR2T34Q8NGX1 318 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 SLCO4A1Q96BD0 722 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 SIPA1Q96FS4 1042 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 IL17FQ96PD4 163 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 C1QTNF7Q9BXJ2 289 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 KLHL4Q9C0H6 718 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 CCDC177Q9NQR7 707 aaPredicted RBP14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 LIMD1Q9UGP4 676 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 AP4S1Q9Y587 144 aa14.93□□□□□ -0.02
THUMPD3-210ENST00000515662 KCNH1O95259 989 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 MAT2AP31153 395 aaKnown RBP14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 PLIN5Q00G26 463 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 MAPKAPK3Q16644 382 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 OGFRL1Q5TC84 451 aaPredicted RBP14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 OR5K2Q8NHB8 316 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 HUS1BQ8NHY5 278 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 OR52E6Q96RD3 313 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 PKP2Q99959 881 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 KCTD14Q9BQ13 255 aaPredicted RBP14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 TRIM15Q9C019 465 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 EHD1Q9H4M9 534 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 ACTR3BQ9P1U1 418 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 FZD4Q9ULV1 537 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 PLAGL1Q9UM63 463 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 MAGEB17A8MXT2 336 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 PEX1O43933 1283 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 CEACAM5P06731 702 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 C1GALT1C1LP0DN25 315 aa14.92□□□□□ -0.02
THUMPD3-210ENST00000515662 PCNAP12004 261 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms