RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 PPP6CO00743 305 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 OR7A17O14581 309 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 SNNO75324 88 aaPredicted RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 KATNA1O75449 491 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 TSPAN8P19075 237 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ACP1P24666 158 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 PSMB5P28074 263 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 CD1CP29017 333 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 CCR10P46092 362 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 CAPZBP47756 277 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 LIMK1P53667 647 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ABCE1P61221 599 aaKnown RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 PRDX1Q06830 199 aaKnown RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 LCP2Q13094 533 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 SQSTM1Q13501 440 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ARL13AQ5H913 290 aaPredicted RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 THEMIS2Q5TEJ8 643 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ICE2Q659A1 982 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ARMC6Q6NXE6 501 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ATG14Q6ZNE5 492 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 LSMEM2Q8N112 164 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 Q8N9G6 341 aaPredicted RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 SNX31Q8N9S9 440 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 IFI44Q8TCB0 444 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 TRPC4APQ8TEL6 797 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 NEIL2Q969S2 332 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 NTMT1Q9BV86 223 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ACAT2Q9BWD1 397 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 NOL11Q9H8H0 719 aaKnown RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 SEMA4BQ9NPR2 832 aaPredicted RBP12.09□□□□□ -0.47
PDPN-210ENST00000513143 ABCF3Q9NUQ8 709 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 EPHA6Q9UF33 1036 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
PDPN-210ENST00000513143 ZNF292O60281 2723 aa12.08□□□□□ -0.47
PDPN-210ENST00000513143 GSAPA4D1B5 854 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 CLGNO14967 610 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 ITM2AO43736 263 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 DUX1O43812 170 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 PRAMEF4O60810 478 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SNUPNO95149 360 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 CCNDBP1O95273 360 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 FKBP9O95302 570 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 OTCP00480 354 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 GP1BAP07359 652 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 CHRNGP07510 517 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 UGT2B7P16662 529 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 GNAZP19086 355 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 PRDX3P30048 256 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 SLC1A6P48664 564 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 ABATP80404 500 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 OCRLQ01968 901 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 E2F2Q14209 437 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SF1Q15637 639 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 PRAMEF9Q5VWM5 478 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 NKAIN2Q5VXU1 208 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SPESP1Q6UW49 350 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SLCO4C1Q6ZQN7 724 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 C17orf64Q86WR6 236 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 OR2L3Q8NG85 312 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 OR52B6Q8NGF0 335 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SLC5A11Q8WWX8 675 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 WDR34Q96EX3 536 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 AHCYL2Q96HN2 611 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 ZNF382Q96SR6 550 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 CDC6Q99741 560 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 CCDC3Q9BQI4 270 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 ZNF395Q9H8N7 513 aaPredicted RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 EML4Q9HC35 981 aaKnown RBP12.08□□□□□ -0.48
PDPN-210ENST00000513143 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 ZNF225Q9UK10 706 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 POMT2Q9UKY4 750 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
PDPN-210ENST00000513143 MDC1Q14676 2089 aaKnown RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 E7EQ34 232 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 UGDHO60701 494 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 LYPLA1O75608 230 aaPredicted RBP12.07□□□□□ -0.48
PDPN-210ENST00000513143 WFS1O76024 890 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 ESRRBO95718 433 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 HSPA4LO95757 839 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 EBLN1P0CF75 366 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 C1GALT1C1LP0DN25 315 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 CMPK1P30085 196 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 CASP2P42575 452 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 CCNG1P51959 295 aa12.07□□□□□ -0.48
PDPN-210ENST00000513143 PKNOX1P55347 436 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms