RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 FIG4Q92562 907 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 SCRN2Q96FV2 425 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 FBXL20Q96IG2 436 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 LYSMD1Q96S90 227 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 NTMT1Q9BV86 223 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 SLC29A3Q9BZD2 475 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 ABCG8Q9H221 673 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 ZDHHC6Q9H6R6 413 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 RSL24D1Q9UHA3 163 aaKnown RBP7.31□□□□□ -1.24
CAST-228ENST00000509903 CCL27Q9Y4X3 112 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 OBSL1O75147 1896 aa7.31□□□□□ -1.24
CAST-228ENST00000509903 ZNF106Q9H2Y7 1883 aaKnown RBP7.31□□□□□ -1.24
CAST-228ENST00000509903 PRRC2BQ5JSZ5 2229 aaKnown RBP7.31□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA12O60330 932 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 DFNA5O60443 496 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 BMP10O95393 424 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CLDN9O95484 217 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CLIC3O95833 236 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ALBP02768 609 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 HIST1H2AGP0C0S8 130 aaPredicted RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 OR56A5P0C7T3 313 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 RAP2AP10114 183 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SRCP12931 536 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 GJA1P17302 382 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 GGT1P19440 569 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 HIST1H2ADP20671 130 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 EPHA1P21709 976 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ALDH3B2P48448 385 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CREMQ03060 361 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CPSF6Q16630 551 aaKnown RBP eCLIP7.3□□□□□ -1.24
CAST-228ENST00000509903 AAK1Q2M2I8 961 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ATP13A5Q4VNC0 1218 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SPANXN4Q5MJ08 99 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 OTUD3Q5T2D3 398 aaPredicted RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 C22orf39Q6P5X5 142 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ABRAXAS1Q6UWZ7 409 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SLC39A5Q6ZMH5 540 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 RNF165Q6ZSG1 346 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 TRIM46Q7Z4K8 759 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 GALNT13Q8IUC8 556 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 OFCC1Q8IZS5 231 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ELMOD1Q8N336 334 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 BPIFB1Q8TDL5 484 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SDCCAG3Q96C92 435 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 HIST1H2AHQ96KK5 128 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 HIST1H2AJQ99878 128 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SH3GL1Q99961 368 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 H2AFJQ9BTM1 129 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 RNF208Q9H0X6 261 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 PARVBQ9HBI1 364 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 DDX18Q9NVP1 670 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 C1orf109Q9NX04 203 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 TUBA8Q9NY65 449 aaPredicted RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 VAPAQ9P0L0 249 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ZNHIT2Q9UHR6 403 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SLC25A13Q9UJS0 675 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 INTS6Q9UL03 887 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA9Q9Y5G4 932 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA8Q9Y5G5 932 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA6Q9Y5G7 932 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA3Q9Y5H0 932 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PCDHGA2Q9Y5H1 932 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CEPT1Q9Y6K0 416 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 AGAP14A8MT82 685 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 LEFTY2O00292 366 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 TGM5O43548 720 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 TRMUO75648 421 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 SNAP29O95721 258 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 UGT2B4P06133 528 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PCNAP12004 261 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 PPM1AP35813 382 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 DEFB103AP81534 67 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 HSPA14Q0VDF9 509 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 KIAA0040Q15053 153 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ZDHHC20Q5W0Z9 365 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 UBE2R2Q712K3 238 aaPredicted RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 DET1Q7L5Y6 550 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 GPR141Q7Z602 305 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 PATL1Q86TB9 770 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 CLEC4FQ8N1N0 589 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 KRTCAP2Q8N6L1 136 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 LEMD2Q8NC56 503 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 OR10A6Q8NH74 314 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CLHC1Q8NHS4 586 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 FBXO30Q8TB52 745 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 SELENOMQ8WWX9 145 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 GTF2H4Q92759 462 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 TMIGD2Q96BF3 282 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 ZNF689Q96CS4 500 aaPredicted RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 MTFMTQ96DP5 389 aaKnown RBP7.3□□□□□ -1.24
CAST-228ENST00000509903 ZNF583Q96ND8 569 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 CCDC115Q96NT0 180 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 OR52E6Q96RD3 313 aa7.3□□□□□ -1.24
CAST-228ENST00000509903 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms