RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TLR1Q15399 786 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 SYT16Q17RD7 645 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 FASTKD1Q53R41 847 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 TCTE1Q5JU00 501 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 YOD1Q5VVQ6 348 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 RPUSD3Q6P087 351 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 CES3Q6UWW8 571 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 AMER3Q8N944 861 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 BRIX1Q8TDN6 353 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 MARVELD3Q96A59 401 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 SLC22A18Q96BI1 424 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 FAM136AQ96C01 138 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 ACAT2Q9BWD1 397 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 MRM3Q9HC36 420 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 C3orf18Q9UK00 162 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 SLC39A10Q9ULF5 831 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 ENTPD4Q9Y227 616 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 CPAMD8Q8IZJ3 1885 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 APCP25054 2843 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 PCDH17O14917 1159 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 CD3EAPO15446 510 aaKnown RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 SRPX2O60687 465 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 IFNB1P01574 187 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 APOA4P06727 396 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 PRR35P0CG20 571 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 PIM1P11309 404 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 CETN2P41208 172 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 EEF1A2Q05639 463 aaKnown RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 HKDC1Q2TB90 917 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 FAAH2Q6GMR7 532 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 SUSD1Q6UWL2 747 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 PPP1R21Q6ZMI0 780 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 SIRT6Q8N6T7 355 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 TTC29Q8NA56 475 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 RELTQ969Z4 430 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 SLC30A3Q99726 388 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 DPH7Q9BTV6 452 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 RAB6BQ9NRW1 208 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 CATSPERZQ9NTU4 200 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 PTGFRNQ9P2B2 879 aa15.15■□□□□ 0.02
RAB40C-202ENST00000509637 MRPS2Q9Y399 296 aaKnown RBP15.15■□□□□ 0.02
RAB40C-202ENST00000509637 A0A1W2PQ72 361 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 TCRBV7S3A2A0A539 114 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 GOLGA6L9A6NEM1 432 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ERI2A8K979 691 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 GOLGA8TH3BQL2 631 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 P2RX6O15547 441 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 NIPSNAP2O75323 286 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 MATN4O95460 622 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ITGAMP11215 1152 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ERGP11308 486 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ACPPP15309 386 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 FDFT1P37268 417 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ST13P50502 369 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 TNFSF10P50591 281 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 SESN2P58004 480 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 PRAMEP78395 509 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 FAM214AQ32MH5 1076 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 CNSTQ6PJW8 725 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 NLRP9Q7RTR0 991 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 PAQR7Q86WK9 346 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 ITLN2Q8WWU7 325 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 RAD51AP1Q96B01 352 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 MIEF2Q96C03 454 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 LRRC45Q96CN5 670 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 CALR3Q96L12 384 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 RBSNQ9H1K0 784 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 EPS8L2Q9H6S3 715 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 INTS7Q9NVH2 962 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 NXT1Q9UKK6 140 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 RUVBL1Q9Y265 456 aaKnown RBP15.14■□□□□ 0.01
RAB40C-202ENST00000509637 PKDREJQ9NTG1 2253 aa15.14■□□□□ 0.01
RAB40C-202ENST00000509637 IGHV1-45A0A0A0MS14 117 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 OR2W5A6NFC9 320 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 ARHGEF33A8MVX0 844 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 MIF4GDA9UHW6 222 aaKnown RBP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 IDSB3KWA1 339 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 STATHP02808 62 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 APRTP07741 180 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 RPS3P23396 243 aaKnown RBP eCLIP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 MAT1AQ00266 395 aaKnown RBP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 PCOLCEQ15113 449 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 CDSNQ15517 529 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 ACSBG2Q5FVE4 666 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 PCID2Q5JVF3 399 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 PTRHD1Q6GMV3 140 aaKnown RBP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 ZNF425Q6IV72 752 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 SLC13A5Q86YT5 568 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-202ENST00000509637 SLC34A3Q8N130 599 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 NR4A3Q92570 626 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 HAS2Q92819 552 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 MFSD3Q96ES6 412 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 OLAHQ9NV23 265 aa15.13■□□□□ 0.01
RAB40C-202ENST00000509637 IL1RAPL1Q9NZN1 696 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms