RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 IL1RNP18510 177 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 KELP23276 732 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ACADLP28330 430 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 PRAMEF9Q5VWM5 478 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 EGFLAMQ63HQ2 1017 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZBTB49Q6ZSB9 765 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 TRMT11Q7Z4G4 463 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 LRRTM4Q86VH4 590 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 MFSD2AQ8NA29 543 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 NELL1Q92832 810 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 VAPAQ9P0L0 249 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 DLGAP4Q9Y2H0 992 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 MYO7AQ13402 2215 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 TCF20Q9UGU0 1960 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 KCNJ13O60928 360 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 TIPRLO75663 272 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 LAMP2P13473 410 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 PDHA2P29803 388 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 KIR3DL1P43629 444 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 NEK2P51955 445 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 HYAL1Q12794 435 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ATP6AP1Q15904 470 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF776Q68DI1 518 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 HMBOX1Q6NT76 420 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 SLCO4C1Q6ZQN7 724 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 AMZ2Q86W34 360 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 DCUN1D3Q8IWE4 304 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 SYTL1Q8IYJ3 562 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR8J2Q8NGG1 315 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF480Q8WV37 535 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 APIPQ96GX9 242 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 APOLD1Q96LR9 279 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR4K3Q96R72 315 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 HAUS8Q9BT25 410 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 THUMPD3Q9BV44 507 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 COQ10BQ9H8M1 238 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 FAM8A1Q9UBU6 413 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ADGRE2Q9UHX3 823 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 K7ESM1 405 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 GDI1P31150 447 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 RPL3P39023 403 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 TBPL1P62380 186 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 FAM98BQ52LJ0 330 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 UGT2A3Q6UWM9 527 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CAMKMTQ7Z624 323 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 LAS2Q8IYD9 372 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 C11orf24Q96F05 449 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 MYADMQ96S97 322 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 PRPF18Q99633 342 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 BDH2Q9BUT1 245 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 PAIP1Q9H074 479 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CCDC177Q9NQR7 707 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 NEUROG3Q9Y4Z2 214 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZFC3H1O60293 1989 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 ELOVL7A1L3X0 281 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 GSTA4O15217 222 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 DFNA5O60443 496 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 TNFAIP8O95379 198 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 UBTFL6P0CB48 400 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CD22P20273 847 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 HRH2P25021 359 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 DRD3P35462 400 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 MTHFRP42898 656 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CCT8P50990 548 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 MTPNP58546 118 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 TXNL4AP83876 142 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CDK3Q00526 305 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 AGBL4Q5VU57 503 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR52E8Q6IFG1 317 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF547Q8IVP9 402 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 CHPFQ8IZ52 775 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 KRTCAP2Q8N6L1 136 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF548Q8NEK5 533 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 MIEF2Q96C03 454 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 BIRC7Q96CA5 298 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 TRAPPC9Q96Q05 1148 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 C1QTNF7Q9BXJ2 289 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 PCBD2Q9H0N5 130 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR52A5Q9H2C5 316 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 RMI1Q9H9A7 625 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 SPATA7Q9P0W8 599 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 INVSQ9Y283 1065 aa16.72■□□□□ 0.27
TRAPPC11-204ENST00000505676 DPPA5A6NC42 116 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 KMOO15229 486 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 LDLRP01130 860 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 RETP07949 1114 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 C1GALT1C1LP0DN25 315 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 RAP2AP10114 183 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR4D2P58180 307 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 ABHD18Q0P651 414 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 KIAA1161Q6NSJ0 714 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 GALNT18Q6P9A2 607 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 LCTLQ6UWM7 567 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 C11orf96Q7Z7L8 435 aa16.71■□□□□ 0.27
TRAPPC11-204ENST00000505676 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms