RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 RNF121Q9H920 327 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 MYADML2A6NDP7 307 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SFTPCP11686 197 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ZNF250P15622 560 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 ETV1P50549 477 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 RHAGQ02094 409 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ZNF79Q15937 498 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 CCDC71Q8IV32 467 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 OR8J3Q8NGG0 315 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ASB7Q9H672 318 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ERVMER34-1Q9H9K5 563 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SMURF1Q9HCE7 757 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 DYRK4Q9NR20 520 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 VNN3Q9NY84 501 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 UBP1Q9NZI7 540 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 NME7Q9Y5B8 376 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 PLXNA1Q9UIW2 1896 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 I3L521 148 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 TOR1AO14656 332 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 TLL1O43897 1013 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SLC22A5O76082 557 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 RECQL4O94761 1208 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 APEHP13798 732 aaKnown RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 SELLP14151 372 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SCNN1AP37088 669 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 CLCN5P51795 746 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 RABGGTBP53611 331 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 CSNK2BP67870 215 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 GABREP78334 506 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 KYAT1Q16773 422 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 FBXO43Q4G163 708 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 KDM4DQ6B0I6 523 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 PLEKHM3Q6ZWE6 761 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 OR2T12Q8NG77 320 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 UBASH3BQ8TF42 649 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 DNAJA4Q8WW22 397 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 APH1BQ8WW43 257 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 TSPAN17Q96FV3 270 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 NT5C1AQ9BXI3 368 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 MRPL39Q9NYK5 338 aaKnown RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 MALT1Q9UDY8 824 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 SLC2A6Q9UGQ3 507 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 HSPB11Q9Y547 144 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 U3KQV3 271 aa12.94□□□□□ -0.34
LETM1-203ENST00000505551 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
LETM1-203ENST00000505551 PLXNB2O15031 1838 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 SHROOM3Q8TF72 1996 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 SCN1AP35498 2009 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ARNTLO00327 626 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 GSTA4O15217 222 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 PAPSS2O95340 614 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 CTSHP09668 335 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ZNF865P0CJ78 1059 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 ATF6P18850 670 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 LMO2P25791 158 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 DAPP51397 102 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 RIN1Q13671 783 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 Q3ZCU0 254 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 TOR1AIP1Q5JTV8 583 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 CPZQ66K79 652 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 IL31Q6EBC2 164 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 DBX2Q6ZNG2 339 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 TRIM48Q8IWZ4 208 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 PTGR2Q8N8N7 351 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 DNASE1L2Q92874 299 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 TRMT61AQ96FX7 289 aaKnown RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 KCNS3Q9BQ31 491 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 CHCHD6Q9BRQ6 235 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 COPS4Q9BT78 406 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ARHGAP39Q9C0H5 1083 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 PRKAG2Q9UGJ0 569 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 MEIS3P2A8K0S8 358 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 CYP7B1O75881 506 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 SIX3O95343 332 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 CD72P21854 359 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ADORA2BP29275 332 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ACY1Q03154 408 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 SCN1BQ07699 218 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 ZNF789Q5FWF6 425 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 XKR7Q5GH72 579 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 KIAA0930Q6ICG6 404 aaPredicted RBP12.93□□□□□ -0.34
LETM1-203ENST00000505551 ANKS3Q6ZW76 656 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 NLRP8Q86W28 1048 aa12.93□□□□□ -0.34
LETM1-203ENST00000505551 CCDC116Q8IYX3 515 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms