RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PRMT9Q6P2P2 845 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF295-AS1Q8N0V1 137 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 KRT222Q8N1A0 295 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 OR52K1Q8NGK4 314 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 ASZ1Q8WWH4 475 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 ALG3Q92685 438 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 HDAC10Q969S8 669 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14□□□□□ -0.178e-8■■■□□ 17.6
TRAF4-212ENST00000498540 SEC14L3Q9UDX4 400 aa14□□□□□ -0.17
TRAF4-212ENST00000498540 MRPS2Q9Y399 296 aaKnown RBP14□□□□□ -0.17
TRAF4-212ENST00000498540 MED13LQ71F56 2210 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 IGHV1-45A0A0A0MS14 117 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 A0A1W2PQ72 361 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 IDSB3KWA1 339 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 SLCO2B1O94956 709 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 TJP3O95049 919 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 RASAL1O95294 804 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 FKBP9O95302 570 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 BMP10O95393 424 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 UQCRHP07919 91 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 FDXRP22570 491 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 BDKRB1P46663 353 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 YBX1P67809 324 aaKnown RBP13.99□□□□□ -0.17
TRAF4-212ENST00000498540 ADORA2A-AS1P86434 159 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 PMP22Q01453 160 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 HIBCHQ6NVY1 386 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-212ENST00000498540 AFTPHQ6ULP2 937 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 RPTNQ6XPR3 784 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF534Q76KX8 674 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 RNF44Q7L0R7 432 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 CNGA4Q8IV77 575 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 OR2L3Q8NG85 312 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF778Q96MU6 729 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 RAB11FIP5Q9BXF6 653 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 SYNPO2LQ9H987 977 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 RUVBL2Q9Y230 463 aaKnown RBP13.99□□□□□ -0.17
TRAF4-212ENST00000498540 PCDHA13Q9Y5I0 950 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 KLK4Q9Y5K2 254 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 NFS1Q9Y697 457 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 CACNA1CQ13936 2221 aa13.99□□□□□ -0.17
TRAF4-212ENST00000498540 A0A1W2PPV9 198 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-212ENST00000498540 F8W8V4 182 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 CRYABP02511 175 aaKnown RBP13.98□□□□□ -0.17
TRAF4-212ENST00000498540 APOA4P06727 396 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 ITGAMP11215 1152 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 AOAHP28039 575 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 EMP2P54851 167 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 RWDD2BP57060 319 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 MUM1Q2TAK8 710 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 PRTGQ2VWP7 1150 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 P3H1Q32P28 736 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 MTFR2Q6P444 385 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 LDB1Q86U70 411 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-212ENST00000498540 OR2A1Q8NGT9 310 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 CABS1Q96KC9 395 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 TTC1Q99614 292 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 TSSK1BQ9BXA7 367 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 TRPC4Q9UBN4 977 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 NF1P21359 2839 aa13.98□□□□□ -0.17
TRAF4-212ENST00000498540 OR2A25A4D2G3 310 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 C19orf84I3L1E1 186 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF189O75820 626 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-212ENST00000498540 WFS1O76024 890 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 C1orf105O95561 183 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 ERVK-10P10266 1014 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 CXCR2P25025 360 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 EFNA3P52797 238 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 KRTAP10-9P60411 292 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 ACVR1Q04771 509 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TBX2Q13207 712 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-212ENST00000498540 DSG2Q14126 1118 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 PCOLCEQ15113 449 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TMED2Q15363 201 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 CDSNQ15517 529 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TSTD2Q5T7W7 516 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 RIPOR1Q6ZS17 1223 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 AMER3Q8N944 861 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 DNAAF3Q8N9W5 541 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 OR6P1Q8NGX9 317 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 OR4L1Q8NH43 312 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 DNAJB8Q8NHS0 232 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 HMGCLL1Q8TB92 370 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 RAD51AP1Q96B01 352 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 ZFYVE21Q9BQ24 234 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TMEM121Q9BTD3 319 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 RNF32Q9H0A6 362 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TINAGQ9UJW2 476 aa13.97□□□□□ -0.17
TRAF4-212ENST00000498540 TTC7AQ9ULT0 858 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-212ENST00000498540 R3HDM2Q9Y2K5 976 aaKnown RBP13.97□□□□□ -0.17
TRAF4-212ENST00000498540 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 LOC102723996A0A087X1L8 192 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 OR5H15A6NDH6 313 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 H0YGG7 62 aa13.96□□□□□ -0.17
TRAF4-212ENST00000498540 PSMD3O43242 534 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms